Gene
| Gene Model ID | pfu_aug2.0_868.1_27864 |
|---|---|
| Locus | scaffold868.1 : 141266 ... 157179 : + |
| To GenomeBrowser | scaffold868.1:141266..157179 |
| Genes list of scaffold | scaffold868.1 |
| Synonym | pfu_aug1.0_1749.1_44126 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_868.1_27864.t1 | 2 | 1 | EMI | 31 | 97 | 1.3e-06 | 28.7 | 6.2e-10 | 1.3e-06 | 28.7 |
| pfu_aug2.0_868.1_27864.t1 | 4 | 1 | EGF_CA | 58 | 64 | 3.3e-09 | 36.5 | 0.5 | 1100.0 | -0.3 |
| pfu_aug2.0_868.1_27864.t1 | 4 | 2 | EGF_CA | 91 | 97 | 3.3e-09 | 36.5 | 2.8 | 5900.0 | -2.7 |
| pfu_aug2.0_868.1_27864.t1 | 4 | 3 | EGF_CA | 112 | 133 | 3.3e-09 | 36.5 | 1.1 | 2300.0 | -1.3 |
| pfu_aug2.0_868.1_27864.t1 | 4 | 4 | EGF_CA | 140 | 178 | 3.3e-09 | 36.5 | 1.6e-12 | 3.3e-09 | 36.5 |
| pfu_aug2.0_868.1_27864.t1 | 2 | 2 | EMI | 144 | 155 | 1.3e-06 | 28.7 | 7.0 | 15000.0 | -5.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_868.1_27864.t1 | gi|699694248|ref|XP_009905752.1| | PREDICTED: epidermal growth factor-like protein 7 [Picoides pubescens] | 1.0e-31 |
| pfu_aug2.0_868.1_27864.t1 | gi|556949788|ref|XP_005987461.1| | PREDICTED: epidermal growth factor-like protein 7-like isoform X4 [Latimeria chalumnae] | 8.0e-31 |
| pfu_aug2.0_868.1_27864.t1 | gi|556949778|ref|XP_005987458.1| | PREDICTED: epidermal growth factor-like protein 7-like isoform X1 [Latimeria chalumnae] | 1.0e-30 |
| pfu_aug2.0_868.1_27864.t1 | gi|556949791|ref|XP_005987462.1| | PREDICTED: epidermal growth factor-like protein 7-like isoform X5 [Latimeria chalumnae] | 1.0e-30 |
| pfu_aug2.0_868.1_27864.t1 | gi|558151658|ref|XP_006120821.1| | PREDICTED: epidermal growth factor-like protein 7 isoform X1 [Pelodiscus sinensis] | 2.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_868.1_27864.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_868.1_27864.t1 atgtttcgtgtgaaacatcaggcatactgcttaattctactcagcttctgtgtgttaaatatttcatcaaggcagtatcc gtttagaccagggaggcgagtatgctcctccaccaaaaggactttggaaatagttccaatgaaccaaacatatgcccgtc ctttctacaatacacgatgtaacaatacacaaaactgctcaaggatatattataaggtgacgtatagaacggtattctac aggcggatagtccacgatatagtacgtcattgctgtccgggatggctaaagcgggatcctagagatgttcactgtagttt tcctgtttgcaaaagtgaatgtgaaaatggaggtagatgtatcggtccagatcaatgcttgtgtccaaagaattttacag gaatgaaatgtcaaaaagatatcgatgaatgcagcagaggtcttcataactgtcaacaagtgtgtacaaatacacacggt gggtatacgtgttcgtgttttgatggatttgttcttgccgggaaacatcaatgtcagtatgaaatagttgtcggtcgtga gatggtaccgaattcacttctgaatgtctatacgttcgtaaaaacttattctcctctttttgattaa |
|
Protein
| Protein ID | pfu_aug2.0_868.1_27864.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_868.1_27864.t1 MFRVKHQAYCLILLSFCVLNISSRQYPFRPGRRVCSSTKRTLEIVPMNQTYARPFYNTRCNNTQNCSRIYYKVTYRTVFY RRIVHDIVRHCCPGWLKRDPRDVHCSFPVCKSECENGGRCIGPDQCLCPKNFTGMKCQKDIDECSRGLHNCQQVCTNTHG GYTCSCFDGFVLAGKHQCQYEIVVGREMVPNSLLNVYTFVKTYSPLFD |
|