Gene
| Gene Model ID | pfu_aug2.0_869.1_31232 |
|---|---|
| Locus | scaffold869.1 : 22906 ... 37525 : + |
| To GenomeBrowser | scaffold869.1:22906..37525 |
| Genes list of scaffold | scaffold869.1 |
| Synonym | pfu_aug1.0_2211.1_44279 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_869.1_31232.t1 | 4 | 1 | WD40 | 149 | 181 | 6.2e-08 | 32.2 | 0.0052 | 19.0 | 5.3 |
| pfu_aug2.0_869.1_31232.t1 | 4 | 2 | WD40 | 203 | 233 | 6.2e-08 | 32.2 | 6.3e-08 | 0.00024 | 20.8 |
| pfu_aug2.0_869.1_31232.t1 | 4 | 3 | WD40 | 248 | 275 | 6.2e-08 | 32.2 | 0.0012 | 4.6 | 7.2 |
| pfu_aug2.0_869.1_31232.t1 | 4 | 4 | WD40 | 288 | 304 | 6.2e-08 | 32.2 | 0.051 | 190.0 | 2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_869.1_31232.t1 | gi|676440304|ref|XP_009049134.1| | hypothetical protein LOTGIDRAFT_173406 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_869.1_31232.t1 | gi|585715879|ref|XP_006825420.1| | PREDICTED: aladin-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_869.1_31232.t1 | gi|301614415|ref|XP_002936677.1| | PREDICTED: aladin [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_869.1_31232.t1 | gi|524865259|ref|XP_005089460.1| | PREDICTED: aladin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_869.1_31232.t1 | gi|147904048|ref|NP_001087073.1| | Aladin [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_869.1_31232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_869.1_31232.t1 atgtcagggggaaatagcattttcctgcagtttcccccggctccttcggagggaaaaatcactcaatttgagcagcatgg gcagctaaaataccaaacatcagaatcaaaacaaaagcttcagaactatccagaggtaactatatcatgtgagaacacaa gaaatgctgctcaaagagagaacgctaaatctgcattccttccccatgatgaaacagtgtggaaaagggcactccatgca tggtatgaaatgggctgcactggtgtgtttgaagaaattgtgaacagtcaaagtgaagttccagactgggcaggatcctt ggcaaagaaaactctgacggtactaaggctgggaaattctttacatggcactttatttcctcatctttcaatgtctaatg aagatatgatagacaagttctcaccagtagggcattggtccaaaagtcccgtacaagctttcagctggcatccccacaca ctgaaacctaattcagcatcagttttggcagtggcttgtaaatcctgtatcttgatatggcatgttgaaccaacatcttt agccactaggccatcgactagctctgtacaagtattacaacagaataaccacgcccccgtcacatgtctatcatgggatc ctagcggtaaaatattactgtcctcatcacctgttgatactgcaattatggcctgggacgttcctatggagacttgtata ccgttacgtcgtgtaggaggagggggagtgtcattactgaaatggtcaccagatggcgctaaagtattctcgtctacacc ttcacatctattcagagtatgggagacaataagatggacatgtgaggtatggacaaagtgcaccagtagatgtaaggcag cttgttggagtcctaaaggagatgtgcttctgtttgccactgaaaatgaaccaatcatatattccctttcatttgctact acaacttatgataacaaagctgtgattggtggatctcaatctgcagtggctgttgttgacctatcagaagtcgacacaca aactgaagatggtgctttagtaaaagtaggtggtttagtgcagaatcttgtatgggacagtacaggcgagagacttgctg ttttattacatgattccaaaggtgatatgtgtagatatgtagctctgttcagaacaaagacgtctcctgtattggacatc acaccctgtggtttggtgtacggtccaatgggaaacattcctcataccatttcatttcaaccaaactatgacaaaggtgc tctactgactgttgtatggagtaatggagaactacagtatatccctctctatttcattgctcggaatgatgtgaatttgg attatcatcaacaagtcaaccctgtaacgaatggacaaatactgtctcctatacgcatgtag |
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Protein
| Protein ID | pfu_aug2.0_869.1_31232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_869.1_31232.t1 MSGGNSIFLQFPPAPSEGKITQFEQHGQLKYQTSESKQKLQNYPEVTISCENTRNAAQRENAKSAFLPHDETVWKRALHA WYEMGCTGVFEEIVNSQSEVPDWAGSLAKKTLTVLRLGNSLHGTLFPHLSMSNEDMIDKFSPVGHWSKSPVQAFSWHPHT LKPNSASVLAVACKSCILIWHVEPTSLATRPSTSSVQVLQQNNHAPVTCLSWDPSGKILLSSSPVDTAIMAWDVPMETCI PLRRVGGGGVSLLKWSPDGAKVFSSTPSHLFRVWETIRWTCEVWTKCTSRCKAACWSPKGDVLLFATENEPIIYSLSFAT TTYDNKAVIGGSQSAVAVVDLSEVDTQTEDGALVKVGGLVQNLVWDSTGERLAVLLHDSKGDMCRYVALFRTKTSPVLDI TPCGLVYGPMGNIPHTISFQPNYDKGALLTVVWSNGELQYIPLYFIARNDVNLDYHQQVNPVTNGQILSPIRM |
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