Gene
| Gene Model ID | pfu_aug2.0_87.1_23415 |
|---|---|
| Locus | scaffold87.1 : 235685 ... 255096 : - |
| To GenomeBrowser | scaffold87.1:235685..255096 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | pfu_aug1.0_1941.1_44193 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable histone-binding protein caf1-like | GO:0004402 GO:0005634 GO:0016573 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_87.1_23415.t1 | 1 | 1 | CAF1C_H4-bd | 19 | 91 | 1.5e-29 | 101.7 | 5.7e-33 | 4.2e-29 | 100.2 |
| pfu_aug2.0_87.1_23415.t1 | 6 | 1 | WD40 | 125 | 144 | 1.2e-37 | 126.4 | 0.29 | 2200.0 | -1.2 |
| pfu_aug2.0_87.1_23415.t1 | 6 | 2 | WD40 | 175 | 209 | 1.2e-37 | 126.4 | 7.3e-11 | 5.5e-07 | 29.2 |
| pfu_aug2.0_87.1_23415.t1 | 6 | 3 | WD40 | 223 | 257 | 1.2e-37 | 126.4 | 7.0e-06 | 0.052 | 13.4 |
| pfu_aug2.0_87.1_23415.t1 | 6 | 4 | WD40 | 651 | 687 | 1.2e-37 | 126.4 | 2.2e-12 | 1.6e-08 | 34.0 |
| pfu_aug2.0_87.1_23415.t1 | 6 | 5 | WD40 | 695 | 731 | 1.2e-37 | 126.4 | 1.3e-09 | 9.3e-06 | 25.3 |
| pfu_aug2.0_87.1_23415.t1 | 6 | 6 | WD40 | 751 | 787 | 1.2e-37 | 126.4 | 8.2e-09 | 6.1e-05 | 22.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_87.1_23415.t1 | gi|752888607|ref|XP_011262226.1| | PREDICTED: histone-binding protein RBBP4 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_87.1_23415.t1 | gi|759082198|ref|XP_011350970.1| | PREDICTED: probable histone-binding protein Caf1 isoform X2 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_87.1_23415.t1 | gi|749754415|ref|XP_011139642.1| | PREDICTED: probable histone-binding protein Caf1 isoform X2 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_87.1_23415.t1 | gi|746857639|ref|XP_011059560.1| | PREDICTED: probable histone-binding protein Caf1 isoform X7 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_87.1_23415.t1 | gi|345483539|ref|XP_003424838.1| | PREDICTED: probable histone-binding protein Caf1 isoform X2 [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_87.1_23415.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23415.t1 atgacagagaaagacggagagggctttgatgatgcagtggaggagagagtgataaatgaagaatataaaatatggaagaa gaacacaccatttttatacgacttggtgatgacacatgccctggaatggcccagtttgacggcccagtggttacctgatg tcacaagaccagaaggcaaagattattcactacacaggctcattcttggaactcatacgacaaggtccgaggagcagaat cacctattaatagccagcgtgcagctaccaaatgataatgcacaatttgatgcctcacattatgatagtgagaaaggaga atttggtggatttgggtcagttagcggtaaaattgagattgaaatcaaaataaaccatgaaggggaggtaaacagagctc gttacatgccccagaatccttgtattatcgctacaaaaaccccatcgagcgacgtcctggtgtttgactatacaaaacat ccctcgaaaccagacccaagtggagagtgtgcaccagagctaaggttaaaaggtcatcaaaaagaagggtacggattatc gtggaatccaaatcttaatggacatttattaagtgcttctgatgaccataccatttgtttatgggacattaacacaacac ctaaggagggtagagtagtagatgccacgacgatattcacaggtcacacgtctgtagtagaggatgttgcctggcacttg ttacatgaaagtttgtttgggtcagtagctgacgatcagaaattaatgatatacattaaaaatggtgcacctaaagttag ctttttagaagtcgtagaattggcaggggatgaatgcaactcggaaaacatttgcaatactattctgagagtacttgaac aacgcaatctttgtgtaacaaatttatcgtgcataacgacagacggagcaagtgttatgacgggttgcaggtcaggggtc acaactttaatgaaggagaaaaactgtcaactgctttcaattcactgcattgcacatcgcctggctctcgcttctggaca agcagcagacaacatcccatatttaaagaaatatcaacatatggtaaacacgatctacaaatacttcaaatactcgccga aacatttaggaaaactgaagaaaatgcagtcagttctggaaatgagtgaaattaaatttaaacaaacttttgcaacaaga tggttgtcctttgagggtgcagttgacgcaatcatcacaaattatgatgctttagttatgtgtttggaacaagaagtcgc cgaagacgatgaccatacagcacgtggcctccttatttttataacggattacttgttcctggcaacctcctacttcttga gcgacgtacttacacatttgtctacgctcagtaaaatttttcaaaaatcagagttggatatagggtcctttgcattatca acatcgtcaacattggcctctataacacagttagagaatagtgacgggctcagtgagcgtgaattcaaaagcaaactgcc ctcgaattttactcagggttttgaatttgggccaagcaaacatcacataaaatgttcggatgcaaatgtagaccgtttca tcaaggcaaggaatgactacctccgtgttctccttggaaatttgaaagcacgtttccaagacaatcaaattatacagtgc ttctctgtgttaacaccaagcagtttaccagagtcattggaggatttttttgtctatggaaacgatgaaataaggaagct tggtgatctgtacagtaatgacaaacagaaaacttcaaagcttggcattgacaagaaaacactttgtgcagaatggccaa tgtttaaacatacaatgcaaacaaaattttctcagtgcaaattctcagaaatggcaaagctatttcttaatgatagctgg gacacacggtctaacaacacaaacaaagcaagtcatacagtggatgcacacacagccgaggttaactgcctgtcattcaa cccctacagcgagtttatcctggcaacaggctcagctgacaagactgttgcattatgggacttaaggaatctcaagttaa aacttcactcatttgaatcacataaagatgaaattttccaggttcagtggtcacctcacaatgagactatcctggcttct agtggtacagaccgcagacttcatgtttgggatctcagcaaaataggtgaggagcaatcagcagaagatgctgaggatgg ccccccagaattactgtttatccatggtggtcatacagcaaagatttccgacttctcatggaaccccaatgaaccctggg taatatgctctgtatcagaggacaacatcatgcaggtttggcaaatggctgagaatatttacaatgatgaagaaccagac accccgtcacaagacttggaagctggaggatcttaa |
|
Protein
| Protein ID | pfu_aug2.0_87.1_23415.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23415.t1 MTEKDGEGFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSLHRLILGTHTTRSEEQN HLLIASVQLPNDNAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH PSKPDPSGECAPELRLKGHQKEGYGLSWNPNLNGHLLSASDDHTICLWDINTTPKEGRVVDATTIFTGHTSVVEDVAWHL LHESLFGSVADDQKLMIYIKNGAPKVSFLEVVELAGDECNSENICNTILRVLEQRNLCVTNLSCITTDGASVMTGCRSGV TTLMKEKNCQLLSIHCIAHRLALASGQAADNIPYLKKYQHMVNTIYKYFKYSPKHLGKLKKMQSVLEMSEIKFKQTFATR WLSFEGAVDAIITNYDALVMCLEQEVAEDDDHTARGLLIFITDYLFLATSYFLSDVLTHLSTLSKIFQKSELDIGSFALS TSSTLASITQLENSDGLSEREFKSKLPSNFTQGFEFGPSKHHIKCSDANVDRFIKARNDYLRVLLGNLKARFQDNQIIQC FSVLTPSSLPESLEDFFVYGNDEIRKLGDLYSNDKQKTSKLGIDKKTLCAEWPMFKHTMQTKFSQCKFSEMAKLFLNDSW DTRSNNTNKASHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS SGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPD TPSQDLEAGGS |
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