Gene
| Gene Model ID | pfu_aug2.0_87.1_23421 |
|---|---|
| Locus | scaffold87.1 : 382608 ... 384324 : - |
| To GenomeBrowser | scaffold87.1:382608..384324 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | pfu_aug1.0_17054.1_47052 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_87.1_23421.t1 | 3 | 1 | Ank_2 | 15 | 57 | 1.6e-12 | 47.5 | 0.00094 | 2.3 | 8.5 |
| pfu_aug2.0_87.1_23421.t1 | 4 | 1 | Ank_4 | 17 | 53 | 8.3e-07 | 29.3 | 0.0087 | 22.0 | 5.7 |
| pfu_aug2.0_87.1_23421.t1 | 3 | 2 | Ank_2 | 18 | 114 | 1.6e-12 | 47.5 | 7.6e-10 | 1.9e-06 | 28.1 |
| pfu_aug2.0_87.1_23421.t1 | 4 | 1 | Ank_5 | 21 | 42 | 1.1e-06 | 28.6 | 0.76 | 1900.0 | -0.7 |
| pfu_aug2.0_87.1_23421.t1 | 4 | 2 | Ank_4 | 68 | 108 | 8.3e-07 | 29.3 | 7.7e-07 | 0.0019 | 18.6 |
| pfu_aug2.0_87.1_23421.t1 | 4 | 2 | Ank_5 | 78 | 108 | 1.1e-06 | 28.6 | 1.8e-06 | 0.0044 | 17.2 |
| pfu_aug2.0_87.1_23421.t1 | 3 | 3 | Ank_2 | 184 | 267 | 1.6e-12 | 47.5 | 2.0e-06 | 0.0049 | 17.1 |
| pfu_aug2.0_87.1_23421.t1 | 4 | 3 | Ank_5 | 204 | 229 | 1.1e-06 | 28.6 | 0.021 | 52.0 | 4.2 |
| pfu_aug2.0_87.1_23421.t1 | 4 | 3 | Ank_4 | 216 | 229 | 8.3e-07 | 29.3 | 5.9 | 14000.0 | -3.3 |
| pfu_aug2.0_87.1_23421.t1 | 4 | 4 | Ank_4 | 249 | 261 | 8.3e-07 | 29.3 | 0.56 | 1400.0 | -0.1 |
| pfu_aug2.0_87.1_23421.t1 | 4 | 4 | Ank_5 | 249 | 261 | 1.1e-06 | 28.6 | 0.15 | 360.0 | 1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_87.1_23421.t1 | gi|676480616|ref|XP_009062118.1| | hypothetical protein LOTGIDRAFT_154671 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_87.1_23421.t1 | gi|524895117|ref|XP_005104046.1| | PREDICTED: uncharacterized protein LOC101860756 [Aplysia californica] | 6.0e-21 |
| pfu_aug2.0_87.1_23421.t1 | gi|303315875|ref|XP_003067942.1| | Oxysterol-binding family protein [Coccidioides posadasii C735 delta SOWgp] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_87.1_23421.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23421.t1 atgaactctatcacagaggaagaattcgacagtgattttgtggcaacgagactattttcggctataagagaccaggattt acgttctgtaaagatgtgtataaaagccagggacaatgtgaacgtaaggtgccgtaagaccggtatgacgtacgtgcatc ttaccgttaaaacggctctccctatatcagaggtcaaatatgtgccaatcatacaccagctttcaaatgccgacatagat ttaaatgcaaaagacaaaaacggaacgactgcgctctatttatcaatagaaaggcaacttctagaggtaatggcagcact tctacgttgtggtgctcattttcaaccaaatgccgaagaggaagtgttttcgtgtttgcgtggtccatttgtgtatgaga ttttgaacagatacaaaagtttctccccgggatactgggacgcattgagggacggtaaggcattccgggtgaatgtatta gtcaaatcatggtgcagaattaatatatccagacatggaataactttaatagaatatgcaaaacagaaaaacgcgagtga aaaagttgtgaggcaattgatagacaacgaggcaacaattgaatttgcacatgcaactattgcaggtgactgtgagaaaa tgcgacatttacttttgcactaccctgtagatctttcaacaaccgacctttcccatcgggaaaacttttttgaaccatat tctccactgactttgcaaggagctgcaatcaaatatggtcataaagatgcactttcgattttgaaggaagcggaagttaa caggcaatcacaaaccgaaaaggatacagttaaatcgtctgttatatgttctatttcttga |
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Protein
| Protein ID | pfu_aug2.0_87.1_23421.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23421.t1 MNSITEEEFDSDFVATRLFSAIRDQDLRSVKMCIKARDNVNVRCRKTGMTYVHLTVKTALPISEVKYVPIIHQLSNADID LNAKDKNGTTALYLSIERQLLEVMAALLRCGAHFQPNAEEEVFSCLRGPFVYEILNRYKSFSPGYWDALRDGKAFRVNVL VKSWCRINISRHGITLIEYAKQKNASEKVVRQLIDNEATIEFAHATIAGDCEKMRHLLLHYPVDLSTTDLSHRENFFEPY SPLTLQGAAIKYGHKDALSILKEAEVNRQSQTEKDTVKSSVICSIS |
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