Gene
| Gene Model ID | pfu_aug2.0_870.1_01206 |
|---|---|
| Locus | scaffold870.1 : 75627 ... 85555 : - |
| To GenomeBrowser | scaffold870.1:75627..85555 |
| Genes list of scaffold | scaffold870.1 |
| Synonym | pfu_aug1.0_11841.1_60949 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cdc6-related protein | GO:0005524 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_870.1_01206.t1 | 1 | 1 | AAA_16 | 237 | 318 | 1.9e-10 | 41.0 | 3.0e-13 | 2.8e-10 | 40.4 |
| pfu_aug2.0_870.1_01206.t1 | 1 | 1 | Cdc6_C | 376 | 449 | 4.1e-08 | 32.8 | 9.7e-11 | 9.0e-08 | 31.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_870.1_01206.t1 | gi|676434920|ref|XP_009047389.1| | hypothetical protein LOTGIDRAFT_138836, partial [Lottia gigantea] | 5.60519e-45 |
| pfu_aug2.0_870.1_01206.t1 | gi|291226446|ref|XP_002733203.1| | PREDICTED: cell division control protein 6 homolog [Saccoglossus kowalevskii] | 1.99993e-41 |
| pfu_aug2.0_870.1_01206.t1 | gi|260807245|ref|XP_002598419.1| | hypothetical protein BRAFLDRAFT_123390 [Branchiostoma floridae] | 4.00001e-41 |
| pfu_aug2.0_870.1_01206.t1 | gi|676443289|ref|XP_009050068.1| | hypothetical protein LOTGIDRAFT_176503, partial [Lottia gigantea] | 1.0e-37 |
| pfu_aug2.0_870.1_01206.t1 | gi|524872741|ref|XP_005093127.1| | PREDICTED: cell division control protein 6 homolog [Aplysia californica] | 4.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_870.1_01206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_870.1_01206.t1 atggaaacccgagtccagagaaagttagagttccaggtgaagaagtctgcaagaacaactaggtcatccattaaaaatag cactcaaatcaaggcatcatcggagaaatcattgacagattcccccaggaaaagaaatagcgatgatgaaaatatcgaag ccggaaacaaatgttcgcctagcaagaacaggaagaaggaagcgcggggacggccacgtagaacggaaacccccgtcaga ggaagcctcagaactaaattataccctgatgagaatgcagggagtcctgttcaatcaccactcaaagttaaacaatgcaa aaattccagcactgcccctccaatgtcatctccgttaaaagtcaaagattgtgtgccagtgtcatctcccctgaaagcta aagactgtaatccacctgtagcttatatgcaccaagaattggctgtgaaaaatgcctgcgcctcgccccgaccaaaaata aagggagagaataaagagaacacacccaccaaaaatacaccccgtagaaagctgttggaaaatacatgtacgtcaccggt gaggtatccgttgagtccgatcaaagtcaaaccattggattacaactatgtttctcccaccaagaaatctcctgtcctta agctacagcgccaggatggacaagcttaccataaagccaagcagtcgttccacacagccaagcctgaacgtctggtgggc cgagaaaaagaaacggaggaaatcaacaagtttgtgcgcggccatgtgtcggccaagacggcagggagtttatacatatc tggggccccagggacgggaaaaacggccactttgtcacatataatagatgatgtcaaggctagccacagttgtaaatgct tatacctgaactgtatgaccctgaaggactctgccaccgtctacggaaaactatacacggatctcaccggcaaatctcca ccatcggcaaaagataggcaacgttgtacaagtccctccaaatcatcacccgtccccaagaaaataggcgtaatacaaat atccaaggtgttgtctgaagtttacgggtcaagttcgtccacacagcaacaagaaagtgtacccttacagcagaaactga tagtttgtacccttctgttgatggtgaagctgggtaaaatgaaagaagtcaccatgggcaagttacatgacacatatact aagatatcacccgtagattactcagaatatcagggagtttgtacgctgctcgaaacacgaggcattatgggtattaaaaa aataaaggacggcagaatggcaaagatcagcctcaaattagatgaacaagaacttgaacataccctccaggataaagttc tcatctcgtcactgttacaagacggacttccaaaataa |
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Protein
| Protein ID | pfu_aug2.0_870.1_01206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_870.1_01206.t1 METRVQRKLEFQVKKSARTTRSSIKNSTQIKASSEKSLTDSPRKRNSDDENIEAGNKCSPSKNRKKEARGRPRRTETPVR GSLRTKLYPDENAGSPVQSPLKVKQCKNSSTAPPMSSPLKVKDCVPVSSPLKAKDCNPPVAYMHQELAVKNACASPRPKI KGENKENTPTKNTPRRKLLENTCTSPVRYPLSPIKVKPLDYNYVSPTKKSPVLKLQRQDGQAYHKAKQSFHTAKPERLVG REKETEEINKFVRGHVSAKTAGSLYISGAPGTGKTATLSHIIDDVKASHSCKCLYLNCMTLKDSATVYGKLYTDLTGKSP PSAKDRQRCTSPSKSSPVPKKIGVIQISKVLSEVYGSSSSTQQQESVPLQQKLIVCTLLLMVKLGKMKEVTMGKLHDTYT KISPVDYSEYQGVCTLLETRGIMGIKKIKDGRMAKISLKLDEQELEHTLQDKVLISSLLQDGLPK |
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