Gene
| Gene Model ID | pfu_aug2.0_870.1_01214 |
|---|---|
| Locus | scaffold870.1 : 209052 ... 213367 : + |
| To GenomeBrowser | scaffold870.1:209052..213367 |
| Genes list of scaffold | scaffold870.1 |
| Synonym | pfu_aug1.0_24760.1_11643 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 40s ribosomal protein s26-like | GO:0003735 GO:0005840 GO:0006412 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_870.1_01214.t1 | 1 | 1 | Ribosomal_S26e | 1 | 105 | 0.0 | 176.3 | 0.0 | 0.0 | 176.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_870.1_01214.t1 | gi|524898902|ref|XP_005105894.1| | PREDICTED: 40S ribosomal protein S26-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_870.1_01214.t1 | gi|640811230|ref|XP_008062224.1| | PREDICTED: 40S ribosomal protein S26 [Tarsius syrichta] | 0.0 |
| pfu_aug2.0_870.1_01214.t1 | gi|390350318|ref|XP_782030.3| | PREDICTED: 40S ribosomal protein S26 isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_870.1_01214.t1 | gi|318237139|ref|NP_001187086.1| | 40S ribosomal protein S26-2 [Ictalurus punctatus] | 0.0 |
| pfu_aug2.0_870.1_01214.t1 | gi|41152199|ref|NP_957036.1| | ribosomal protein S26 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_870.1_01214.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_870.1_01214.t1 atgactcagaaaaggcgtaacaatgggcggagtaaaaatgggcgtggtcacgtgaagtttgtgagatgtacaaactgtgc ccgctgtgtgcctaaagacaaggctatcaagaagtttgtgattaggaacattgttgaagctgccgctgtcagggatatct ctgatgctagtgtatatgatgtatatgccctgcccaagctatatgccaagttattttactgtgtctcctgtgctatccac tccaaggtagtaagaaacagatccaaggaggcacgaaaggatagatcaccccctctgaggttccgaccaatcagagatgg tgctgcaccaaggaccggaggtcaaggtggtggccctccgccagctcgttcataa |
|
Protein
| Protein ID | pfu_aug2.0_870.1_01214.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_870.1_01214.t1 MTQKRRNNGRSKNGRGHVKFVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYDVYALPKLYAKLFYCVSCAIH SKVVRNRSKEARKDRSPPLRFRPIRDGAAPRTGGQGGGPPPARS |
|