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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_873.1_11265
Locus scaffold873.1 : 210548 ... 223623 : +
To GenomeBrowser scaffold873.1:210548..223623
Genes list of scaffold scaffold873.1
Synonym pfu_aug1.0_12258.1_25008

Manual annotation
Annotation by Blast2GO
Annotation GO
dipeptidyl aminopeptidase-like protein partial GO:0065007

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_873.1_11265.t1 1 1 DPPIV_N 136 239 5.3e-21 74.6 1.8e-24 6.7e-21 74.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_873.1_11265.t1 gi|156717844|ref|NP_001096462.1| dipeptidyl aminopeptidase-like protein 6 [Xenopus (Silurana) tropicalis] 2.0e-38
pfu_aug2.0_873.1_11265.t1 gi|701392550|ref|XP_009966870.1| PREDICTED: dipeptidyl aminopeptidase-like protein 6, partial [Tyto alba] 4.0e-38
pfu_aug2.0_873.1_11265.t1 gi|593734824|ref|XP_007112846.1| PREDICTED: dipeptidyl aminopeptidase-like protein 6-like, partial [Physeter catodon] 3.0e-36
pfu_aug2.0_873.1_11265.t1 gi|700425922|ref|XP_009951453.1| PREDICTED: dipeptidyl aminopeptidase-like protein 6, partial [Leptosomus discolor] 3.0e-36

Transcript
Transcript IDpfu_aug2.0_873.1_11265.t1
Definition-
>pfu_aug2.0_873.1_11265.t1
atggagaaaatggagttagtagggaatacagcagagaagaagaactggaagggaattttcatcgcacttcttgtgatcgt
tatcgtcatcgctcttgtcatcgtagccatcgtcttactatcaccaagtccaaaagaggaagataacagattaagactaa
ccttagacgacgtacttggcgacgatttacatccaaaacatttccatcctgtatggtcgctctctagagttattatcgcc
ccgtatttacgttttattctagatgaagactggtttgttcaccgggatgccgatggcgccctctacatgtttaattgctc
agccaatgaatcatcacctaacagacgaatgcaacttatggacaacaaaacatttagggaactaaacaccaacacgtatt
ttgtatcaccggataggaagtatatactactggcacatgatcgaatacctatttacagacattccagagtatcgaagtat
tcagtctatatcgtggagcaaggggtacatacggaatttaatcctgcacattccagaggacctttctttcaatacgtagg
atgggctcccgtcggtcacagcctggtttatgtgcaggagaataatatttactatataacaagtccaggtcacggcacca
atataaaaccaacaaagataacatcagacggagaatcgggaaggatactcaacggaattccagactgggtttatgaag

Protein
Protein IDpfu_aug2.0_873.1_11265.t1
Definition-
>pfu_aug2.0_873.1_11265.t1
MEKMELVGNTAEKKNWKGIFIALLVIVIVIALVIVAIVLLSPSPKEEDNRLRLTLDDVLGDDLHPKHFHPVWSLSRVIIA
PYLRFILDEDWFVHRDADGALYMFNCSANESSPNRRMQLMDNKTFRELNTNTYFVSPDRKYILLAHDRIPIYRHSRVSKY
SVYIVEQGVHTEFNPAHSRGPFFQYVGWAPVGHSLVYVQENNIYYITSPGHGTNIKPTKITSDGESGRILNGIPDWVYE

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