Gene
| Gene Model ID | pfu_aug2.0_875.1_17896 |
|---|---|
| Locus | scaffold875.1 : 16156 ... 28690 : + |
| To GenomeBrowser | scaffold875.1:16156..28690 |
| Genes list of scaffold | scaffold875.1 |
| Synonym | pfu_aug1.0_320649.1_36017 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_875.1_17896.t1 | 2 | 1 | EF-hand_7 | 1 | 106 | 8.4e-09 | 35.4 | 1.3e-09 | 2.1e-06 | 27.7 |
| pfu_aug2.0_875.1_17896.t1 | 3 | 1 | EF-hand_1 | 1 | 15 | 1.3e-08 | 33.5 | 2.9e-05 | 0.048 | 12.9 |
| pfu_aug2.0_875.1_17896.t1 | 4 | 1 | EF-hand_6 | 1 | 15 | 2.4e-06 | 26.9 | 0.00057 | 0.94 | 9.5 |
| pfu_aug2.0_875.1_17896.t1 | 4 | 2 | EF-hand_6 | 52 | 64 | 2.4e-06 | 26.9 | 1.3 | 2200.0 | -1.0 |
| pfu_aug2.0_875.1_17896.t1 | 3 | 2 | EF-hand_1 | 57 | 65 | 1.3e-08 | 33.5 | 2.5 | 4100.0 | -2.5 |
| pfu_aug2.0_875.1_17896.t1 | 4 | 3 | EF-hand_6 | 85 | 112 | 2.4e-06 | 26.9 | 1.9e-06 | 0.0032 | 17.2 |
| pfu_aug2.0_875.1_17896.t1 | 3 | 3 | EF-hand_1 | 86 | 111 | 1.3e-08 | 33.5 | 3.1e-08 | 5.0e-05 | 22.3 |
| pfu_aug2.0_875.1_17896.t1 | 2 | 2 | EF-hand_7 | 87 | 114 | 8.4e-09 | 35.4 | 1.8e-06 | 0.0029 | 17.6 |
| pfu_aug2.0_875.1_17896.t1 | 4 | 4 | EF-hand_6 | 120 | 127 | 2.4e-06 | 26.9 | 5.2 | 8500.0 | -2.8 |
Transcript
| Transcript ID | pfu_aug2.0_875.1_17896.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_875.1_17896.t1 atgctggacgtcaaccatgacgggaaaatctccatcgaagacgtggaagaatccaggaacaaatttacaaacctccacga actcctagaagaaaaggcaaagggtgttaaagtagatatggaaaattggtggactgaatacatatttggacagaacggac caaaggagatttcagaggctgactttgtcaagagattgcagacggcctacgaaaccgacaaggcagcctttgtaaaaaag atggaagattgctttaacacgatttttgatgtgattgacaccaacaaagatcgccaaattgagctggatgaattcgtcct cgtatttaaagctttcggccacgagaacgaaccggccgtaaacaagtttttcggcctctataacgcacctgcaggaatcc ctataaaagacattgtggccgcttacgtcaaattcacaaccagtgacaactccaacgacacggattacgtcaaccaatcg ctcaaattagtgctgtaa |
|
Protein
| Protein ID | pfu_aug2.0_875.1_17896.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_875.1_17896.t1 MLDVNHDGKISIEDVEESRNKFTNLHELLEEKAKGVKVDMENWWTEYIFGQNGPKEISEADFVKRLQTAYETDKAAFVKK MEDCFNTIFDVIDTNKDRQIELDEFVLVFKAFGHENEPAVNKFFGLYNAPAGIPIKDIVAAYVKFTTSDNSNDTDYVNQS LKLVL |
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