Gene
| Gene Model ID | pfu_aug2.0_875.1_17899 |
|---|---|
| Locus | scaffold875.1 : 36207 ... 121845 : - |
| To GenomeBrowser | scaffold875.1:36207..121845 |
| Genes list of scaffold | scaffold875.1 |
| Synonym | pfu_aug1.0_15066.1_46831 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pleckstrin homology domain-containing family g member 5 isoform x3 | GO:0007165 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_875.1_17899.t1 | 1 | 1 | RhoGEF | 635 | 805 | 2.2e-32 | 112.4 | 7.5e-36 | 3.7e-32 | 111.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_875.1_17899.t1 | gi|260790849|ref|XP_002590453.1| | hypothetical protein BRAFLDRAFT_124569 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_875.1_17899.t1 | gi|525020391|ref|XP_005057710.1| | PREDICTED: pleckstrin homology domain-containing family G member 5 isoform X3 [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_875.1_17899.t1 | gi|525020389|ref|XP_005057709.1| | PREDICTED: pleckstrin homology domain-containing family G member 5 isoform X2 [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_875.1_17899.t1 | gi|525020387|ref|XP_005057708.1| | PREDICTED: pleckstrin homology domain-containing family G member 5 isoform X1 [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_875.1_17899.t1 | gi|513219323|ref|XP_004947399.1| | PREDICTED: pleckstrin homology domain-containing family G member 5 isoform X24 [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_875.1_17899.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_875.1_17899.t1 atgctcatcaaaaacacaaattctgggcttcaaggtagcgacctcatactatggtcaaattataacgaagactcaatcgg tatcttcagatttgagtacgttcctgagatttgcagttttatttggataactatacgcaaaangctttcggttgtgttag agcatggctcacagtcctcgcttgaagagaaaggactgacgtcatccagcgaggttgacgctgtcatgacagcattggat gacgccattgatttcgatgatgaaaatgaaagtaggtcatgtgataagacttccggctcctctgacgatagcgaagtaag tgcaataaacgaacagaatatacaaaacgaagaaagcttccgagagaatctgaacggaattatgataaaagatgggaaat cgtctgtctcaaaacgagtccggttcagtctggaaaataggagcctaagaaaatcaaaaagttgtgaaatttaccggaca cttgcagaaccttgtatgtttgcggtgtctgtcaaaatgatcgaagtgacgcaagatatgacggcggatggaaattatat atgtaaagagatcgagaatttccaggctttggtatgccatcaccccgactgtaccgagactaacaacggacaccctctgc tcatgtgccgagaatgtgaccgaggtatccatggaaacccggagttcagcagccatcttgttcttgacgcttccaaaagg agaactgctgtgagcctgattggtcgaggagattccacgcccaaccttaaaggtcaagcagaggtcagtgaatctgaggt cggaggtcaaggtgacgataatcagagtacaaacggagaggacatggtggatgggatctatatgaagaagccagacgtag tagacttcagacccccacccacaccttcagctgctgaacttaaactcaagaggaaaaaagttctcaaacttaagcgtcga cacacagacatccaaatggcaataccaaagagaaacttcagacccccacccacaccttcagctgctgaacttaaactcaa gaggaaaaaagttctcaaacttaagcgtcgacacacagacggaagtcaaagtggtaacgattttaactcggaagattctg acgataatgaaccaaatatcgtcagacgtaaatctgacgacctacattcggggtcaccctcacagcgtctgatacgcaga cattctaagagtgtaatcagcgatgagtgtttcaccatacgattccctgaaataggcgataatgacatggaaatcgtcgc ggcaattcgtggtgtcagtttaagggctgctttggtgcccctaatagagaggcgagggctggacatatcacgtatcaatg tatttgtggaggcctccaacacccccctgcctctagaatgcgaatccttcttattaggtggaaatacactacacatcaaa gagaaagattctgacctgggtttctccaagaataatagtagacccaacagtggtggtaaaaactctgcaaataaaaactc aaaaggaagcggggtggggagcttgagaagtaggcgtgggataaacctatccatcgatgacaccacgcccattcccgcgg tacttgcctccatcagtccccaggggaccctcacggggtacacggaggggaggagggttaaggatcgcagcaaactcacc aatcttttcagtcctatgggatcaaaggataaggagaagcatgagcagctgagtgaactcctgaattcctacagcagtaa cgggttacctcccatgccggacctcctgaatataggacgccgccaggtggacgaggccttgttcaacattgaacctcatt ggagctccatcgttgataatgcctctaccctcacaaaacgtcagcatgatcaacaagaggctatatgggaacttcttaac acagaagtccagtaccttaaatctcttagagtcataactgatttatttatgtgctgtctgatcaacttacaaagtgaaag tctactcaacgagattgacacagagcagttgttcagtaatatcaacgacatcgtacgcatcaactgtgatttctgggaaa atcatctcctgaaagtgttaaaggacgcacgggaaatgagggagccacttaacccctccgacatgaaggacgggtttaaa aagtttccagagctcttttctccgtacaccaagtattgtatagagcagaaaccctgtacagagtatatgaaagccagata ctctgacaacgatttgttcaaaacttttgtagtgtgggctgagacacagaagcagtgtaacagattaaagctgaccgatc tactggtcaagcccatgcagagactgaccaaatactctctattactccaagctatactcaggaaaacggaatgtgaaaga caacgtagggatctactcgaaatggatccttcttgttga |
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Protein
| Protein ID | pfu_aug2.0_875.1_17899.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_875.1_17899.t1 MLIKNTNSGLQGSDLILWSNYNEDSIGIFRFEYVPEICSFIWITIRKXLSVVLEHGSQSSLEEKGLTSSSEVDAVMTALD DAIDFDDENESRSCDKTSGSSDDSEVSAINEQNIQNEESFRENLNGIMIKDGKSSVSKRVRFSLENRSLRKSKSCEIYRT LAEPCMFAVSVKMIEVTQDMTADGNYICKEIENFQALVCHHPDCTETNNGHPLLMCRECDRGIHGNPEFSSHLVLDASKR RTAVSLIGRGDSTPNLKGQAEVSESEVGGQGDDNQSTNGEDMVDGIYMKKPDVVDFRPPPTPSAAELKLKRKKVLKLKRR HTDIQMAIPKRNFRPPPTPSAAELKLKRKKVLKLKRRHTDGSQSGNDFNSEDSDDNEPNIVRRKSDDLHSGSPSQRLIRR HSKSVISDECFTIRFPEIGDNDMEIVAAIRGVSLRAALVPLIERRGLDISRINVFVEASNTPLPLECESFLLGGNTLHIK EKDSDLGFSKNNSRPNSGGKNSANKNSKGSGVGSLRSRRGINLSIDDTTPIPAVLASISPQGTLTGYTEGRRVKDRSKLT NLFSPMGSKDKEKHEQLSELLNSYSSNGLPPMPDLLNIGRRQVDEALFNIEPHWSSIVDNASTLTKRQHDQQEAIWELLN TEVQYLKSLRVITDLFMCCLINLQSESLLNEIDTEQLFSNINDIVRINCDFWENHLLKVLKDAREMREPLNPSDMKDGFK KFPELFSPYTKYCIEQKPCTEYMKARYSDNDLFKTFVVWAETQKQCNRLKLTDLLVKPMQRLTKYSLLLQAILRKTECER QRRDLLEMDPSC |
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