Gene
| Gene Model ID | pfu_aug2.0_876.1_21231 |
|---|---|
| Locus | scaffold876.1 : 1 ... 11812 : + |
| To GenomeBrowser | scaffold876.1:1..11812 |
| Genes list of scaffold | scaffold876.1 |
| Synonym | pfu_aug1.0_812.1_22322 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase isozyme l5 | GO:0004843 GO:0005622 GO:0006511 GO:0008242 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_876.1_21231.t1 | 2 | 1 | Peptidase_C12 | 2 | 197 | 0.0 | 184.9 | 0.0 | 0.0 | 183.5 |
| pfu_aug2.0_876.1_21231.t1 | 2 | 2 | Peptidase_C12 | 288 | 302 | 0.0 | 184.9 | 0.72 | 5300.0 | -3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_876.1_21231.t1 | gi|676488969|ref|XP_009064786.1| | hypothetical protein LOTGIDRAFT_236234 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_876.1_21231.t1 | gi|524874713|ref|XP_005094091.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_876.1_21231.t1 | gi|638262993|ref|NP_001279101.1| | ubiquitin carboxyl-terminal hydrolase L5 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_876.1_21231.t1 | gi|675626579|ref|XP_008941628.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5, partial [Merops nubicus] | 0.0 |
| pfu_aug2.0_876.1_21231.t1 | gi|704469015|ref|XP_010086413.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5, partial [Pterocles gutturalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_876.1_21231.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_876.1_21231.t1 ggtgtaaaggtgttcaggtggaggagctatggagtatggatgctgatagctttgaaaaattaaaaccagtccatggattg attttcctattcaaatggcagccagaaactgaatcagaaggatctctagtccaagacagcagactggagaaaatattctt tgccaaacagatgcttgttgaccaagttaaccctatatttcaggtaataaacaacgcatgtgccactcaagccatactca gtattctgctgaactgtgctcactcagatgttcagttaggggaaacgttaggctcgttcaaggaatttgttcagagtttt gagccatcgttacgaggactcaccctcagtaattctgatacaattcgtcaagtgcacaatggcttctctaggcaacaaat gtttgagtttgacgagaaacttgccaagaaagatgacgatgtattccattttgtgggttatcttcctatagatggcagac tgtatgaactagatggtttgaaagatggtccagtggatttaggtgcaataccagcaaactcagactggctagatgttgtt agaccgattattgagaaaagaatgcaaaaatacagcggtgacgaaatccatttcaacttgatggccatagtctcagatag aaaactacagtatgaaaaacaaatcaaagaattacaagagactggtatggagacagacacagcccaggcagaaataaatc aactcaggataatgatacaagatgaggaaatgaagatgaagagatacaagatagagaatgtaagaagaaagcacaactat ttacccttcattatggaactgttgaagattttagcagagcagaagcagttacttccccttgtagaaaaggcaaaagaaaa agcagcaaagaggagagaagaaaaggcaaagtagcccagatactcaacgaaaagaaagcaacgtgaagccagaaggtaca aaacagagggtagaggtagaggcactaagctgtacccagagctccttgtgattcttcctcatgctatacatgagaaatcg gttttatttattaagtgtatttgccgtagtaattggacattcggaacagattactgtaaacgtggaaatttttgcgtatt tagtgaatcaaagagctccgcaaaaatttcacccacacgaaaatatcaccactga |
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Protein
| Protein ID | pfu_aug2.0_876.1_21231.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_876.1_21231.t1 CKGVQVEELWSMDADSFEKLKPVHGLIFLFKWQPETESEGSLVQDSRLEKIFFAKQMLVDQVNPIFQVINNACATQAILS ILLNCAHSDVQLGETLGSFKEFVQSFEPSLRGLTLSNSDTIRQVHNGFSRQQMFEFDEKLAKKDDDVFHFVGYLPIDGRL YELDGLKDGPVDLGAIPANSDWLDVVRPIIEKRMQKYSGDEIHFNLMAIVSDRKLQYEKQIKELQETGMETDTAQAEINQ LRIMIQDEEMKMKRYKIENVRRKHNYLPFIMELLKILAEQKQLLPLVEKAKEKAAKRREEKAKXPRYSTKRKQREARRYK TEGRGRGTKLYPELLVILPHAIHEKSVLFIKCICRSNWTFGTDYCKRGNFCVFSESKSSAKISPTRKYHH |
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