Gene
| Gene Model ID | pfu_aug2.0_879.1_31240 |
|---|---|
| Locus | scaffold879.1 : 9346 ... 34170 : + |
| To GenomeBrowser | scaffold879.1:9346..34170 |
| Genes list of scaffold | scaffold879.1 |
| Synonym | pfu_aug1.0_505.1_29301 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_879.1_31240.t1 | 1 | 1 | Thi4 | 8 | 46 | 5.5e-07 | 28.9 | 1.6e-09 | 1.2e-06 | 27.8 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 1 | FAD_binding_3 | 9 | 41 | 5.0e-06 | 25.7 | 1.2e-08 | 9.0e-06 | 24.9 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 1 | DAO | 10 | 45 | 2.5e-08 | 33.2 | 4.2e-10 | 3.1e-07 | 29.6 |
| pfu_aug2.0_879.1_31240.t1 | 1 | 1 | FAD_binding_2 | 10 | 47 | 6.5e-08 | 31.8 | 1.4e-10 | 1.1e-07 | 31.1 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 1 | Lycopene_cycl | 10 | 55 | 1.5e-07 | 30.6 | 1.7e-06 | 0.0013 | 17.7 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 1 | HI0933_like | 10 | 44 | 3.3e-06 | 25.8 | 2.5e-07 | 0.00019 | 20.0 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 1 | Pyr_redox | 11 | 47 | 3.3e-06 | 27.4 | 1.7e-08 | 1.3e-05 | 25.5 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 1 | Pyr_redox_3 | 12 | 51 | 6.9e-06 | 26.2 | 3.0e-08 | 2.2e-05 | 24.6 |
| pfu_aug2.0_879.1_31240.t1 | 1 | 1 | NAD_binding_8 | 13 | 78 | 5.7e-14 | 51.8 | 2.4e-16 | 1.8e-13 | 50.3 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 1 | Amino_oxidase | 18 | 409 | 0.0 | 233.2 | 0.0 | 0.0 | 182.7 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 2 | Lycopene_cycl | 218 | 271 | 1.5e-07 | 30.6 | 0.00023 | 0.17 | 10.7 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 2 | Pyr_redox | 220 | 249 | 3.3e-06 | 27.4 | 9.6 | 7100.0 | -2.6 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 2 | FAD_binding_3 | 221 | 236 | 5.0e-06 | 25.7 | 7.4 | 5500.0 | -4.0 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 2 | DAO | 226 | 268 | 2.5e-08 | 33.2 | 0.27 | 200.0 | 0.6 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 2 | HI0933_like | 233 | 268 | 3.3e-06 | 25.8 | 0.025 | 18.0 | 3.6 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 2 | Pyr_redox_3 | 241 | 270 | 6.9e-06 | 26.2 | 4.9 | 3600.0 | -2.3 |
| pfu_aug2.0_879.1_31240.t1 | 2 | 2 | Amino_oxidase | 496 | 566 | 0.0 | 233.2 | 6.9e-16 | 5.1e-13 | 48.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_879.1_31240.t1 | gi|742181599|ref|XP_010888261.1| | PREDICTED: amine oxidase [flavin-containing] B isoform X1 [Esox lucius] | 0.0 |
| pfu_aug2.0_879.1_31240.t1 | gi|301606444|ref|XP_002932838.1| | PREDICTED: amine oxidase [flavin-containing]-like isoform X1 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_879.1_31240.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31240.t1 atggatgatcacagcatgcctaatgccgatgtggttgttataggggctggattaagtggattgagtgcagcaaagatatt acacgaacgaggtttgaatgtcattgttctggaagcccgtgaccgagtaggtggcagaacttatacacttcggaacgaag atgtgacatatgtagatttgggtggctcctatgtaggtcccacccagaacagaattttacgtctggctgatgagtttgga atccagaccttcctcactcaagatacagaggatttgatttttcattcaaagggacgctccgaaaagataactggtactgt tcctcccgtgtctggtctgctggccacacttgacgtaaacaatctttttagagaaatagacgaaatgggagaagagatac cagtcgatgctccctgggatgctccacatgcggaagagtgggacaagatgacagtaaaagagtttttcaataaaactata tggaccaaaggtgcatggaagttgggagagcagaccgtaaacgtgtgtgtaacgtctgagagtcacaaggtttcgttgct atggtttctgtggtatttacgccagtgtggtggatccaacagaattctgtcgacagataatggaggacagcaaagaaagt ttgcaggaggatctcaacagataagtgagagaattgcagaaaaacttggcaaagataggttatttcttgaccatgcagtt tgcagcataacgcaaaatgaccagtccatacaagtctcttgtctgaacggaaaagtacttaagtgtcgccatgttattct tgccgtccctttgcctttacaaacgaggctgaccgttgacccttcacttccgtctctaaggaatcagctgattcagaggg ttcccatgggttctgttataaaaacgtttgtctattacgacagaccattttggcaggagagaggccacagtggaactgcc attattgaagacgaggaagctttagtagagtttacatttgctgacacgaaaccagacggtacaaaaccagcgataatggg cttaattctagctggaagggctaaaacatgtgtaacgttgacaaaggaggaacgaagggacagaatctgtaaactatacg ccagggtgtttgagacagatcaagctcttaagtgggtacattacgaggagcttaactggctagcagagcagtggtctggt ggatgctattctgccatgatgcctcctggatttctgactacatttggaaggtccactactcacacatggaaagccccagc attgtaccttattctgtatattcaagggccactactcacacatggaaagccccagcattgtaccttattctgtatattca aggtctgctactcacacatggaaagtcccagcattctaccttattctgtatattcatggtccacttctcacacatggaaa gtcccagcattgtaccttagtcctgactcatccaaaattagctgggtacattacgaggagcttaactggctagcagaaca gtggtctggtggatgctattctgccatgatgcctcctggattcctgactacatttggaagagaaataagaaaacccgttg gtagaatacattttgcaggaacagagacagccacagaatggtcgggatacatggagggagcggtacaagcaggagagcgt gcagcaagggagattctctttgagagaggagaaattaaccaatctgaaatatggaaagaggaaccagagaataaggtcgt caaacctcagccatttccaacaagtttcttcgagaggaatgctccgtcagtaggaggatttctgaagttccttggatgta tatcaacgctagctgtagcttgttccggtgctatgttatatcgacggtttaagacatag |
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Protein
| Protein ID | pfu_aug2.0_879.1_31240.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31240.t1 MDDHSMPNADVVVIGAGLSGLSAAKILHERGLNVIVLEARDRVGGRTYTLRNEDVTYVDLGGSYVGPTQNRILRLADEFG IQTFLTQDTEDLIFHSKGRSEKITGTVPPVSGLLATLDVNNLFREIDEMGEEIPVDAPWDAPHAEEWDKMTVKEFFNKTI WTKGAWKLGEQTVNVCVTSESHKVSLLWFLWYLRQCGGSNRILSTDNGGQQRKFAGGSQQISERIAEKLGKDRLFLDHAV CSITQNDQSIQVSCLNGKVLKCRHVILAVPLPLQTRLTVDPSLPSLRNQLIQRVPMGSVIKTFVYYDRPFWQERGHSGTA IIEDEEALVEFTFADTKPDGTKPAIMGLILAGRAKTCVTLTKEERRDRICKLYARVFETDQALKWVHYEELNWLAEQWSG GCYSAMMPPGFLTTFGRSTTHTWKAPALYLILYIQGPLLTHGKPQHCTLFCIFKVCYSHMESPSILPYSVYSWSTSHTWK VPALYLSPDSSKISWVHYEELNWLAEQWSGGCYSAMMPPGFLTTFGREIRKPVGRIHFAGTETATEWSGYMEGAVQAGER AAREILFERGEINQSEIWKEEPENKVVKPQPFPTSFFERNAPSVGGFLKFLGCISTLAVACSGAMLYRRFKT |
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