Gene
| Gene Model ID | pfu_aug2.0_879.1_31241 |
|---|---|
| Locus | scaffold879.1 : 43626 ... 76224 : + |
| To GenomeBrowser | scaffold879.1:43626..76224 |
| Genes list of scaffold | scaffold879.1 |
| Synonym | pfu_aug1.0_17050.1_32762 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_879.1_31241.t1 | 2 | 1 | HRM | 53 | 118 | 4.7e-16 | 58.5 | 6.4e-20 | 4.7e-16 | 58.5 |
| pfu_aug2.0_879.1_31241.t1 | 2 | 1 | 7tm_2 | 134 | 194 | 4.6e-36 | 124.1 | 2.6e-20 | 1.9e-16 | 59.8 |
| pfu_aug2.0_879.1_31241.t1 | 2 | 2 | 7tm_2 | 218 | 298 | 4.6e-36 | 124.1 | 7.9e-23 | 5.8e-19 | 68.1 |
| pfu_aug2.0_879.1_31241.t1 | 2 | 2 | HRM | 389 | 398 | 4.7e-16 | 58.5 | 0.13 | 1000.0 | -0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_879.1_31241.t1 | gi|759164814|ref|XP_011373743.1| | PREDICTED: LOW QUALITY PROTEIN: parathyroid hormone/parathyroid hormone-related peptide receptor [Pteropus vampyrus] | 0.0 |
| pfu_aug2.0_879.1_31241.t1 | gi|548516387|ref|XP_005696184.1| | PREDICTED: LOW QUALITY PROTEIN: parathyroid hormone/parathyroid hormone-related peptide receptor [Capra hircus] | 0.0 |
| pfu_aug2.0_879.1_31241.t1 | gi|426249982|ref|XP_004018722.1| | 0.0 | |
| pfu_aug2.0_879.1_31241.t1 | gi|742213074|ref|XP_010860803.1| | PREDICTED: parathyroid hormone/parathyroid hormone-related peptide receptor [Bison bison bison] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_879.1_31241.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31241.t1 atgtgtttacttagaacactctctctcatagcagtatcgttctggacgacatcagggaaaattgtgagtcttgataaata cgagcaggacaggagggtgtgggaggaggcaatcaactgtctgatacaaataaactcaaccttacctccaaacggttcct actgtttcccaacatgggatcggattgcatgttggccttacaccaaggccggtgacacatggagtataccgtgtccagac tatatcaatggattcgacactgatggccatgcgtacagaacatgtactgtcaatggtacttggttctacaaaccagaggt gaacaacacatggacggattattcacattgcatacctactcagacagggacaccgaaactgataaaggagcacctaggat ctataagtctgatgttcaatataggatacggagtatcactggtatccctggttttggccaccttcataatgctcttcttc aggcgactaagatgtcaacgtaccaccatccatgtaaatctattcacctcttttattctgcgtgccacgatgtcatttct gaaagaaaatttattggtcgagggtgtaggattccctgctgacgtcatcagaacggatacgggtggtgtgaagtttatcg aagagggatcgcttaattttgcaatattcatcaacatcattagagtcttatttaccaagctgaacgcatttaacgccaga gaaactaaaaaattcaggtacaaaaagctggccaagtccacgctggtgttaataccattgtttggtgttcattacgtcgt attcataggtttaccggacaatgtcagcgatacagcgttgcttgtcaaactttattttgaaatgggatttaactcttttc aagggttctttgtgtccttgatattttgtttcttcaatggagaggttcaggcagaaataagaaaaaagtggatgaggttc agactgtcacgtggtaaaggcttaaatggacgatcaacacgtgacacaatgacgtcgttcgtgtcacgtggtcgcggagg ctcacttgtctcaaattcaaactctgcagattcaaaagatcacgttcattctaatggtgactgtgtaagggaagtgtcat gtgatcaacctttggtggatgaacagaattacattttgcaaaagtataagtcgtgcacaaagaatggccactcaaagaat aacaacagagttaatctcgtctttctcaaaccatttgatcggtga |
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Protein
| Protein ID | pfu_aug2.0_879.1_31241.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31241.t1 MCLLRTLSLIAVSFWTTSGKIVSLDKYEQDRRVWEEAINCLIQINSTLPPNGSYCFPTWDRIACWPYTKAGDTWSIPCPD YINGFDTDGHAYRTCTVNGTWFYKPEVNNTWTDYSHCIPTQTGTPKLIKEHLGSISLMFNIGYGVSLVSLVLATFIMLFF RRLRCQRTTIHVNLFTSFILRATMSFLKENLLVEGVGFPADVIRTDTGGVKFIEEGSLNFAIFINIIRVLFTKLNAFNAR ETKKFRYKKLAKSTLVLIPLFGVHYVVFIGLPDNVSDTALLVKLYFEMGFNSFQGFFVSLIFCFFNGEVQAEIRKKWMRF RLSRGKGLNGRSTRDTMTSFVSRGRGGSLVSNSNSADSKDHVHSNGDCVREVSCDQPLVDEQNYILQKYKSCTKNGHSKN NNRVNLVFLKPFDR |
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