Gene
| Gene Model ID | pfu_aug2.0_879.1_31244 |
|---|---|
| Locus | scaffold879.1 : 102685 ... 138435 : - |
| To GenomeBrowser | scaffold879.1:102685..138435 |
| Genes list of scaffold | scaffold879.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_879.1_31244.t1 | 1 | 1 | Glycos_transf_2 | 203 | 320 | 6.7e-26 | 90.9 | 4.3e-29 | 1.6e-25 | 89.7 |
| pfu_aug2.0_879.1_31244.t1 | 3 | 1 | Ricin_B_lectin | 360 | 390 | 2.0e-07 | 31.0 | 0.16 | 600.0 | 0.4 |
| pfu_aug2.0_879.1_31244.t1 | 1 | 1 | Glyco_transf_7C | 438 | 496 | 5.1e-06 | 25.8 | 3.1e-09 | 1.2e-05 | 24.7 |
| pfu_aug2.0_879.1_31244.t1 | 3 | 2 | Ricin_B_lectin | 583 | 645 | 2.0e-07 | 31.0 | 2.4e-06 | 0.009 | 16.0 |
| pfu_aug2.0_879.1_31244.t1 | 3 | 3 | Ricin_B_lectin | 643 | 677 | 2.0e-07 | 31.0 | 3.7e-05 | 0.14 | 12.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_879.1_31244.t1 | gi|675869950|ref|XP_009020535.1| | hypothetical protein HELRODRAFT_81901, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_879.1_31244.t1 | gi|391346483|ref|XP_003747502.1| | PREDICTED: putative polypeptide N-acetylgalactosaminyltransferase 9-like [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_879.1_31244.t1 | gi|676434934|ref|XP_009047394.1| | hypothetical protein LOTGIDRAFT_138892, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_879.1_31244.t1 | gi|157114750|ref|XP_001652403.1| | AAEL001121-PA [Aedes aegypti] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_879.1_31244.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31244.t1 atgtggctcctcagcatctttataatcatagacagacatatatctcctctagaagagcttctgaggcgctcctcgtttga aaagggacaactgaggagcccagttaatattcatgttcaagaggagttgcttaaaagtagagttgattatggtgctagaa atctatctggggatattgtgaatggtaaagtggactttcttcgtacgaaaaggatggatgatcaaagaagtgacgagaaa ttgagtgtgcatgataaaaataatcaaatgaaggaaaggacgtcgaataaaaaggacgttacacaaaaagatgagttgaa caaacttgtgataaaaacaaactctagcattccaaaggttgaagacagatatttatggcccctccagagaagatataacc tatccttaccaggtcatcacggcactggagttgttattgacaaagagaagctaaatgctggagacagaaagctttacgat gaaggctacagaaagaatggttttaaccagcttgccagtgacagaatacctgtagatagatatgtcggtgatgccaggca tgaaaactgtaaaaagcgaaagtaccgtcaggatctaccagacgcttctgtcgtcatcatattccacaacgaggcttgga gtgtgctatggcggacagttcatagcatatggaacacatcccctcgtagatacctgaaggagatctatattgttgatgat gcctcaacacacgatcacctgggaagtaaattggacgaagaagtgaagaaatacccggatgtacatttactgcggactgg aaacaggtctgggctcattcgagcccgatctttgggattttcgcatgtgaagacagaagtggcgatatttttagattcac actgtgagtgtacggaaggatggttggaaccattacttgagcggatagctgaagataaaagaaatgtggcaatagacgct ggcgatttaacagagcgtcgtaagataaaggaacaattgaaatgtaaaccgttcaaatggttcctggacaatatttatcc cgaactgtatctaccaattaatagcaaagcaactggacatattcagagctttgttgttggacattgtatacagacaccgg tatttagctgggattatggaaaaccacctactgtcaatccatgtagtgagatggtttttatacaatttagtcctgttgat ataacccaaatgttctatggagggttcgatttagacctttattttaattggagaacgattccaaaaagagaacataatcg gcgaggcaatctgacggcgcctgtctggacgccgaccttacttggatgttgttttgcaattaacagtgacttctttaggg agataggagtctatgacatggggatgtttatatggggagcagagaacatggaactctcattcaagacttggctctgcggt ggtcatctggagataattccctgttctcacgttggtcacatgttccgatctgtgatgccttatacgtgggaaggagacgg gatgaaaacactaattagaaactgcctgcgtgttgcagaggtctggatggacgaatacaagcatctttactttgacagaa tattctatgcaaatcaaaagatagatgctggcaatttaacagagcgtcgtaagataaaagaacaattgaaatgtaaaccg ttcaaatggttcctggacaatatttatcccgaactgtatctaccaataaatagcaaagcaactggacatattcagagctt tgttgttggacactgtatacagacaccggtattcagctggaattatggaaaacctcctactgtcaatccatgtagtgaga tggtttttatacaacactggacactgacattggaggatactatacgtcgggatgaaggttgccttggatacgacggaggc agttcgaaaaacacaataagaagttttgttaagaatgtatgtatacaactagcagataacaaacaaagcttgatagtgat gccctgtaatgactccctcgaacagaaatggaagtggactagaaggaaacttacaatcccaccgtaa |
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Protein
| Protein ID | pfu_aug2.0_879.1_31244.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31244.t1 MWLLSIFIIIDRHISPLEELLRRSSFEKGQLRSPVNIHVQEELLKSRVDYGARNLSGDIVNGKVDFLRTKRMDDQRSDEK LSVHDKNNQMKERTSNKKDVTQKDELNKLVIKTNSSIPKVEDRYLWPLQRRYNLSLPGHHGTGVVIDKEKLNAGDRKLYD EGYRKNGFNQLASDRIPVDRYVGDARHENCKKRKYRQDLPDASVVIIFHNEAWSVLWRTVHSIWNTSPRRYLKEIYIVDD ASTHDHLGSKLDEEVKKYPDVHLLRTGNRSGLIRARSLGFSHVKTEVAIFLDSHCECTEGWLEPLLERIAEDKRNVAIDA GDLTERRKIKEQLKCKPFKWFLDNIYPELYLPINSKATGHIQSFVVGHCIQTPVFSWDYGKPPTVNPCSEMVFIQFSPVD ITQMFYGGFDLDLYFNWRTIPKREHNRRGNLTAPVWTPTLLGCCFAINSDFFREIGVYDMGMFIWGAENMELSFKTWLCG GHLEIIPCSHVGHMFRSVMPYTWEGDGMKTLIRNCLRVAEVWMDEYKHLYFDRIFYANQKIDAGNLTERRKIKEQLKCKP FKWFLDNIYPELYLPINSKATGHIQSFVVGHCIQTPVFSWNYGKPPTVNPCSEMVFIQHWTLTLEDTIRRDEGCLGYDGG SSKNTIRSFVKNVCIQLADNKQSLIVMPCNDSLEQKWKWTRRKLTIPP |
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