Gene
| Gene Model ID | pfu_aug2.0_879.1_31247 |
|---|---|
| Locus | scaffold879.1 : 180447 ... 187483 : + |
| To GenomeBrowser | scaffold879.1:180447..187483 |
| Genes list of scaffold | scaffold879.1 |
| Synonym | pfu_aug1.0_52765.1_63424 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_879.1_31247.t1 | 1 | 1 | SRCR | 539 | 631 | 2.2e-12 | 47.1 | 9.9e-16 | 4.9e-12 | 46.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_879.1_31247.t1 | gi|676435705|ref|XP_009047644.1| | hypothetical protein LOTGIDRAFT_200156 [Lottia gigantea] | 2.0e-30 |
| pfu_aug2.0_879.1_31247.t1 | gi|383859040|ref|XP_003705006.1| | 2.0e-13 | |
| pfu_aug2.0_879.1_31247.t1 | gi|676460393|ref|XP_009055608.1| | hypothetical protein LOTGIDRAFT_104858 [Lottia gigantea] | 3.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_879.1_31247.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31247.t1 atgacgcgacacaaatgtacaataataatggccttactacctctactgaccatcataagctacgtccatgggcagagcct acagacacacaatataacaaacgaaatagacccattcgaggaaagcgttgttacagccatgctgcgcattgttgacgaga aattcgattcgctgagcacaagaatgacgtcattagagcgtgcgcttaccagtttgcaatattacaacctccggcagttt cgtatcgtgaatacccatctacatgccttagatacgctactacaggccatacacggccgagtaggccagcaggatgttac aaacaaagaactggccacgtccgtgagcttactgaagagagagatgaaaaatatgggacttcaaaataaagaatcttttg acaacatagagacagacattgtccatcttaataaagatctgactcagaaaatatcattcgcggaagaatctgtgataaac tttatgaataaaacaaacggcggatatgttccaagctacgactttagtccaattcttaatgatgaaaaagaaaacaaaac tgttgaatatctcaacacattgaacagaatagaagacaaggtcgacaatttgtccaattttaccgctcaagtctttcaaa atttgacgacagaaactaataccgagaatgaaaacaaaacagaaagaaatatattgatgaaaagcttgattgagctgaac ggaaatgtaagagaatctattgccttttatcgtcatactggagacttggtcgagagaattgttggcgctacagagacggt agctgacgaccaagatcgtatacgggaggatatcaagctgtttatggaggtacaaacaaacaacaccgccaaatgtggta ataaagtcaccgagaaccaacgcagtgcaattcatgatggtgagattagcaacgaaataagcccggtagtggagaatttt ccaggaaagaccgacgacaaatcgaaagtagaaagtgaaagagctcagcatatcctcgacgaagtgataaatatatcaaa cgccactaccaaagcagtagagatgttacatgatctagcaaaaatgaatcaagagtcgaccaaatcaagtattttcaatt tagaaaatgaagtgtcaaaactccgcgaaatcagagaacattcggaaaacatcactcaccatcctaatcttttgaccggg cttgccgaatttaatttggaagaattatcaaatacaagtaaagctatttatacaatggtcgaggctatagcatcaaacac tggctggattccatacatattccacaatttacaatttgttgaagttcaagtgaaccagactttactgacatctaaagcgg cattaaaacgagcaattctacacgacaccattcaagctaaagtgtctgttcaatatgaaccaaaagctacagctgcgcct cctgtggctgaacctgtggcgacgtctgccagttgtgagaaaactgattacgtcaatgatacgtcatcgttggtcaagga actgaggtttgtccataaaacaaaccaaagaattcatcgtttgattcctgcccttacaaaactgctcggagaaccagagc catttttcacgcttgttgatggagacagcgataatcaaggtagaatagaggtttacaggagaggttactggggaactata tgtgaccctctgtcacacgtacaggcatcctatatatgtaggcatcttggatacttaggtggagtggctgcagatccggg ttattttgggccaggaacaggtggattttggcgcgtgaattatacgtgtttattcagtagtcaatgtgaggccgctgtaa tggtagtagacgatgatcgctgtaaccatgacaacgacatgggagtcatatgtgttttgtttatattttgtgttgaaatg atatattttgatctgagttcattggaactgttacattgtacacaaaccatgatgttgtttttttcctataattnatga |
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Protein
| Protein ID | pfu_aug2.0_879.1_31247.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31247.t1 MTRHKCTIIMALLPLLTIISYVHGQSLQTHNITNEIDPFEESVVTAMLRIVDEKFDSLSTRMTSLERALTSLQYYNLRQF RIVNTHLHALDTLLQAIHGRVGQQDVTNKELATSVSLLKREMKNMGLQNKESFDNIETDIVHLNKDLTQKISFAEESVIN FMNKTNGGYVPSYDFSPILNDEKENKTVEYLNTLNRIEDKVDNLSNFTAQVFQNLTTETNTENENKTERNILMKSLIELN GNVRESIAFYRHTGDLVERIVGATETVADDQDRIREDIKLFMEVQTNNTAKCGNKVTENQRSAIHDGEISNEISPVVENF PGKTDDKSKVESERAQHILDEVINISNATTKAVEMLHDLAKMNQESTKSSIFNLENEVSKLREIREHSENITHHPNLLTG LAEFNLEELSNTSKAIYTMVEAIASNTGWIPYIFHNLQFVEVQVNQTLLTSKAALKRAILHDTIQAKVSVQYEPKATAAP PVAEPVATSASCEKTDYVNDTSSLVKELRFVHKTNQRIHRLIPALTKLLGEPEPFFTLVDGDSDNQGRIEVYRRGYWGTI CDPLSHVQASYICRHLGYLGGVAADPGYFGPGTGGFWRVNYTCLFSSQCEAAVMVVDDDRCNHDNDMGVICVLFIFCVEM IYFDLSSLELLHCTQTMMLFFSYNX |
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