Gene
| Gene Model ID | pfu_aug2.0_879.1_31248 |
|---|---|
| Locus | scaffold879.1 : 188617 ... 191661 : + |
| To GenomeBrowser | scaffold879.1:188617..191661 |
| Genes list of scaffold | scaffold879.1 |
| Synonym | pfu_aug1.0_97400.1_49501 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_879.1_31248.t1 | 4 | 1 | Cornifin | 11 | 127 | 1.1e-15 | 57.9 | 1.6e-10 | 3.4e-07 | 30.2 |
| pfu_aug2.0_879.1_31248.t1 | 4 | 2 | Cornifin | 86 | 193 | 1.1e-15 | 57.9 | 5.4e-07 | 0.0011 | 18.7 |
| pfu_aug2.0_879.1_31248.t1 | 4 | 3 | Cornifin | 307 | 393 | 1.1e-15 | 57.9 | 6.5e-08 | 0.00014 | 21.7 |
| pfu_aug2.0_879.1_31248.t1 | 4 | 4 | Cornifin | 455 | 494 | 1.1e-15 | 57.9 | 0.00053 | 1.1 | 8.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_879.1_31248.t1 | gi|701346073|ref|XP_009982640.1| | PREDICTED: fibrous sheath CABYR-binding protein-like, partial [Tauraco erythrolophus] | 5.0e-15 |
| pfu_aug2.0_879.1_31248.t1 | gi|260820136|ref|XP_002605391.1| | hypothetical protein BRAFLDRAFT_74211 [Branchiostoma floridae] | 1.0e-14 |
| pfu_aug2.0_879.1_31248.t1 | gi|612061647|ref|XP_007505747.1| | PREDICTED: trichohyalin-like [Monodelphis domestica] | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_879.1_31248.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31248.t1 atgccagaacattgtcagaaaagtgtgccaaaagtatgccagaacgttgccgaaagagtgtgccagaagtatgccagagg tatgccagaagagtgtgccagaatattgccagaagagtgtgccagaagtatgccagaagagtgtgccagaacgttaacaa aattgtgtgccagacgtttttcagaagagtgtgccaggaaattgccaaaagagtatgccagaagagattatgtcagaaga gtgtgccaaaagtatgccagaatgttgccgaaagagtgtgccagaagtatgtcagaagagtgtgccagaatgttgccaga agagtgtgccagaagtataccagaacgttgcccagaagagtgtgccagaacgttgtcaaaagtgtgtaccagaagtatgc cagaaaagtgtaccagaaggttgccaaaagagtatgcaattagagtgtgcaagaagtttgccagaagagtatgtcagaag gctgccagaagagtgtacacaaacgttgccagaagagtgtgccataacgttgccagaagagtatgccagaatgctgccaa aagagtgtgccagaagtatgacagaagagtgtgtatggtagaagaggttaccaaaagactgtaccagaagtatgccagaa ttattccagaaaagtgtgtcagaaggttaccaaaagagtatgccagaagtatgctagaagagtgtgtcaaaagaactccg aatgacgtcactgtaacgacatgccgtacctgcgatgcctctcgggttttatcattgcgtgaaatggcgaaggaaaatag cgatgacggcgaggttaaattgcaagcctgtgcagcctatgaccttgttgcgagttgcaaaataatatgccagaagagtg tgccaaaaggattcaagaagagtgtgtcagaggttgccagaagagtgtgccagaagagtgtgccagagaagtgtgccaga ggagtgtgccagtacgttgccagaggagtgtgccagaagagtatgccagaagagtgtgacagaatactacctgaagagtg tacaagagcgttgccagaacagtgtgcaagaatgttgacaggagagtgtgcccgaagattgacagaaatgtctgcttaag agtgtgccaaaagtatgccagaacgttgccgaaagagtgtgccagaagtatgccagaagattgccagaatagtgtacaag aagtttgccagaagagtatgtcagaaggctgccagaagagtgtacacagacgttgccagaagagtgtgccagaacgttgc cagaagagtataccagaatgctgccaaaagagtgtgccagaagtatgatagaagagtgtgcatggtagatgaggttacca aaagagtgtaccagaagtatgccagaacgttgccagaagaatgtgccagaagtataccagaagagtgtgccagaaggtta ccaaaagagtatgccagaagtatgctagaagtgtgtgtcaaaaggttaccaaaagagtcaatctcctacgtatgcgtccg atttcagttccgcttttcttcacttttgccgtcatcgcctattgtttacagactggaagtggggcttcatatttgtaaat taagtattgcaagtaaataccatcaggtttgtctacatttctgcggtatacagtga |
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Protein
| Protein ID | pfu_aug2.0_879.1_31248.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_879.1_31248.t1 MPEHCQKSVPKVCQNVAERVCQKYARGMPEECARILPEECARSMPEECARTLTKLCARRFSEECARKLPKEYARRDYVRR VCQKYARMLPKECARSMSEECARMLPEECARSIPERCPEECARTLSKVCTRSMPEKCTRRLPKEYAIRVCKKFARRVCQK AARRVYTNVARRVCHNVARRVCQNAAKRVCQKYDRRVCMVEEVTKRLYQKYARIIPEKCVRRLPKEYARSMLEECVKRTP NDVTVTTCRTCDASRVLSLREMAKENSDDGEVKLQACAAYDLVASCKIICQKSVPKGFKKSVSEVARRVCQKSVPEKCAR GVCQYVARGVCQKSMPEECDRILPEECTRALPEQCARMLTGECARRLTEMSAXECAKSMPERCRKSVPEVCQKIARIVYK KFARRVCQKAARRVYTDVARRVCQNVARRVYQNAAKRVCQKYDRRVCMVDEVTKRVYQKYARTLPEECARSIPEECARRL PKEYARSMLEVCVKRLPKESISYVCVRFQFRFSSLLPSSPIVYRLEVGLHICKLSIASKYHQVCLHFCGIQ |
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