Gene
| Gene Model ID | pfu_aug2.0_88.1_26815 |
|---|---|
| Locus | scaffold88.1 : 1 ... 32365 : - |
| To GenomeBrowser | scaffold88.1:1..32365 |
| Genes list of scaffold | scaffold88.1 |
| Synonym | pfu_aug1.0_13140.1_53908 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_88.1_26815.t1 | 1 | 1 | 7TM_GPCR_Srsx | 42 | 261 | 3.1e-07 | 29.8 | 1.8e-10 | 4.5e-07 | 29.2 |
| pfu_aug2.0_88.1_26815.t1 | 1 | 1 | 7tm_1 | 47 | 285 | 3.2e-27 | 95.2 | 1.8e-30 | 4.5e-27 | 94.8 |
| pfu_aug2.0_88.1_26815.t1 | 4 | 1 | TIL | 112 | 137 | 4.0e-06 | 26.8 | 3.6 | 8800.0 | -3.1 |
| pfu_aug2.0_88.1_26815.t1 | 4 | 2 | TIL | 327 | 337 | 4.0e-06 | 26.8 | 4.7 | 12000.0 | -3.5 |
| pfu_aug2.0_88.1_26815.t1 | 2 | 1 | Gal_Lectin | 334 | 412 | 8.3e-25 | 86.9 | 3.4e-28 | 8.3e-25 | 86.9 |
| pfu_aug2.0_88.1_26815.t1 | 4 | 3 | TIL | 411 | 449 | 4.0e-06 | 26.8 | 6.0 | 15000.0 | -7.7 |
| pfu_aug2.0_88.1_26815.t1 | 1 | 1 | VWD | 449 | 601 | 2.0e-21 | 76.8 | 1.4e-24 | 3.4e-21 | 76.0 |
| pfu_aug2.0_88.1_26815.t1 | 2 | 2 | Gal_Lectin | 699 | 716 | 8.3e-25 | 86.9 | 4.3 | 11000.0 | -3.2 |
| pfu_aug2.0_88.1_26815.t1 | 4 | 4 | TIL | 734 | 785 | 4.0e-06 | 26.8 | 1.6e-09 | 4.0e-06 | 26.8 |
Transcript
| Transcript ID | pfu_aug2.0_88.1_26815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_88.1_26815.t1 atggttggcaacaattcaactgagataattggcaacaacacttcaaatttcacaaatgccgaaagcaatgaaatagagca tctcgttcctaccattttgaatgtgctctcattcattacatacctgattggaattttaggaaatagttccattatctttg tctattggaaagcccccaaaatcagggacacaacaatgacattcatactgaatcttgctgtagcagatttctttactttg gtcgttatgtgcttctacgagatctcgatattcttggatctacagttccgatacaagtcgttctttggttgcatcgtgtt agagcttcttgtcagttgctctacctttgcctcccaattttgcatttcctcggctacattcgacaggtttgtggctatct gctactgtacaaggtatcaggagattatgtgtaaaagaatggtcagaatactgctcattggttcttggatcgcagcagtt attctcgcaggattgcctttgtatggttttcggaacaactttgacttatacaattgtttatatcacttaatccttcccga tgtcgtttacatcacaagctcaagtgcactgatattcctaatgtttctgacactatcattccaaatcaaaattctcctta aggcatgggaattttaccttaaaacctcatccaactctgagacgtctgctgctaaaaggaaagccatactaaacggaaaa ctgatgggcttacttaccttcatgtttataatgtgctggcttccttacaatatcgttcaattacactttggatccagggg tcaagacctaaatgactatcttttgaccataactctatactgtggattactaaacaaggccaaacaactgtcgaaacagt ggaagaaaactgactcgctcaggccaaagaagacaaagactgttcctttagttttaaaggttatggtctgggatgcagaa gtaaagtcaaaacttatatgtgaacacacgaaagaaaccctctcatgtcctgacgaagaaaaaattgcgatcatatatgc aaattacggtcgcaaagactcggagccatgtccacattcccaaagatcagatacaaattgtgtatctgccaatagtctac gtatactccgcgaagactgtcagggaaagcgatcctgtcaactagaggcgacaaatgctaagtttggagatccctgcgtt ggcacattcaagtacctggaattgagatacgaatgcaaaaaggcatgtgcgcctaacgcagaaatgacattcaacggggg atgccgatgtaagctaggatacttcggtgatccatatcaggaaggatgtacaaaaatgtgcatgtgtaaagcgcgcggag atccacattatgaaacctatgatggaaaaatgatccatttccaaggcaactgtaggtacgtaatgacccgatcgacgcat ccggattgcaggttagaggtagccgtgaagaataatcaccgctcaagtcgccctgtcaccatcactcgagaggtcgattt cacttataatggaataacattacgtcttctacctcagaggaaactcaaggtggatggaatagaaacagacccttgtaatt acgtcagttctgacgggtccatttctatcagctgctgtggcaacgtcttacgtgtggtgaccaatccatgtggttccatc gtcgagtgggacggtatacacgcagttcacgtcatgatccctaagatttatgctgagggtgattattcctccggaatatg tgggaactgcaatggcgatccgactgatgatatggtcacacagtttggacgcaatgtagaaggcgaagaaaatgcgtatt ataaattaggtagcagctggcagattgaggatacctccgacattaaggatcaagaagtctgtacagatgaaatcatacct ttaccaccttgtgccagaaaaacggtgctggccgccgcagcaactgagaagtgcggaatgatcaatcctaaagtagatgg accatttaaggaatgcttgaatgaggcaaacattaagtccaaggagtacgacgattgtgtgtttgattactgtcttttct ctgaagaaaagccggagttaatgcagcagtctatatgcaatatgcacaatgatttgagacaaatgtgtaatgatatggga tacaatataacatggagggatcgaaactgtccaaccgagtgtggcgagaatcaacagtggtttaatgttctgtcaggatg tcagccaacttgtagaaggcccaaccctaaaagatgcaagctaccaccatccagcggctgtggctgtaagccaggttatg ttcttggtgctttgggaaaatgtgtgcacgcagagactgggtgtggctgtactgatggtgataagaaatattatccg |
|
Protein
| Protein ID | pfu_aug2.0_88.1_26815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_88.1_26815.t1 MVGNNSTEIIGNNTSNFTNAESNEIEHLVPTILNVLSFITYLIGILGNSSIIFVYWKAPKIRDTTMTFILNLAVADFFTL VVMCFYEISIFLDLQFRYKSFFGCIVLELLVSCSTFASQFCISSATFDRFVAICYCTRYQEIMCKRMVRILLIGSWIAAV ILAGLPLYGFRNNFDLYNCLYHLILPDVVYITSSSALIFLMFLTLSFQIKILLKAWEFYLKTSSNSETSAAKRKAILNGK LMGLLTFMFIMCWLPYNIVQLHFGSRGQDLNDYLLTITLYCGLLNKAKQLSKQWKKTDSLRPKKTKTVPLVLKVMVWDAE VKSKLICEHTKETLSCPDEEKIAIIYANYGRKDSEPCPHSQRSDTNCVSANSLRILREDCQGKRSCQLEATNAKFGDPCV GTFKYLELRYECKKACAPNAEMTFNGGCRCKLGYFGDPYQEGCTKMCMCKARGDPHYETYDGKMIHFQGNCRYVMTRSTH PDCRLEVAVKNNHRSSRPVTITREVDFTYNGITLRLLPQRKLKVDGIETDPCNYVSSDGSISISCCGNVLRVVTNPCGSI VEWDGIHAVHVMIPKIYAEGDYSSGICGNCNGDPTDDMVTQFGRNVEGEENAYYKLGSSWQIEDTSDIKDQEVCTDEIIP LPPCARKTVLAAAATEKCGMINPKVDGPFKECLNEANIKSKEYDDCVFDYCLFSEEKPELMQQSICNMHNDLRQMCNDMG YNITWRDRNCPTECGENQQWFNVLSGCQPTCRRPNPKRCKLPPSSGCGCKPGYVLGALGKCVHAETGCGCTDGDKKYYP |
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