Gene
| Gene Model ID | pfu_aug2.0_88.1_26818 |
|---|---|
| Locus | scaffold88.1 : 95976 ... 135188 : + |
| To GenomeBrowser | scaffold88.1:95976..135188 |
| Genes list of scaffold | scaffold88.1 |
| Synonym | pfu_aug1.0_266.1_58052 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_88.1_26818.t1 | 1 | 1 | H_lectin | 994 | 1062 | 7.7e-15 | 54.3 | 3.5e-18 | 2.6e-14 | 52.6 |
Transcript
| Transcript ID | pfu_aug2.0_88.1_26818.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_88.1_26818.t1 atgaaggaaaggaggggatctccaacaagacccgacatcgacagcaaaacatcaatacaaagtgaaaaagcagagaagac atacacagcaagagacacaaagggacaaggaacagccaaaacgacatcaaaataccaagcgcaaaagacaacacataaac caacgagaccaatgggccagcggtgccgacttaggacggccatctgccagaatcgtaaaataaaacataagaggcggaaa atcaaatcagctttagagagctacaagcgcttaaggtttagctgcggatgcttaggggcagatgcgcgttttctcaaggc gagcttaggagtgtgtaagccatttcatctcgtgcaattacgaactatcatcaatggcaggtacgaaaaggatcaaactg aacagtattcagctctaatggtagactcatgtccggtaggaagcagcaaagagttaaaagagaaatgttcatctttaaat gatacgaagtcacgcttaaagcactaccctgttaccggaaatgaactgccgttaacattttacaatatattttgcgcaaa atgtaacaatgtattaaactttacatcatggtcgttggacataaattgttcattatttgcggattttaattatttgacta ctcttgatgaagttgtagatttggcaatcgagagaagatgtattttccaagcttacaagaaggacgatgaatttggggaa tccaaagaggaaaactgctttgatattgatggaagtcaaacgattattacaaaatgtaaccagacttcagaatggatcgt atatgatggaaacattgcatacgcttgtgaatcattcttcaaaggaaattacagatttttcaaaaacgtattttgctata tgtgtaatccatctggacatgaattcatgactaatacaatcgctacatgtaatgttactggagaatggttgatacaagat agcggcttacaacaagcatgcaccgatcttcccatgtcattttcgacagcaccgttcaaaaacatattttgctatctctg taatagaggcaacgattcctcacacatgtttgttgatattatgggaaaagtaaatgaatttccaatagaagacatttatt ttcatttccagtacgatctgtatattgctgacttcaacttgcagtacttcatgcataactctctgaagagaacgaaaaaa gaaaaacaacttggcgatttcattcggaccccatttgatatttcttctttcatgataaataacggaagttatataaacat gactaatttgcttcttcaaaatgcagcaatcgatggaagtatctctgtttgtaaaagtcgacgttctgttttcccaaagg gctatggcgatggggagtgtaagtgcgatattctttgtttttatgggaaatacagcccctgggtatcatgctgttctgac ctagcgcttcaaataccatttcattgtcaggatattctagatttatcacatgctgcttttccacggtctaagaaaagagg atttcttacaataaatggatgctttcaagaaacaacgctcaaactgatcagactcggttgtgcattgcccgaagacaatg acattttctcaacaattcccttgaatgaggctaatggaataaactatgataatctttattgtatcttatgtaattttgag agtgacaaacttttaaggaagatgcaaggtattattgacctttcaaactccagtataaatgagacaaattctggtagcga taaccatattaatcagcttatagaagtgtacaaaagcagaaaggatagttttactatatggaacctcgagatgggtcttt gcagaaacataacctgttacagtggaaagtattttgatggagaaaactgtaaacccctcatggccattaccatgaactta aggtactccatgacggtaaaaataggactatataccttcgacgaatcaaattcatacttaatgttaccagaatctcctac atatgtacaacaaacactcgatgagttattgagttacaacggtggaaattccctacaaaactttaagggaatagagggat ttgacggtgggccaggagtctctaaagcaatttgtttaacaatagattttgacatttatttcaagtcaagtgtttcaagg attcaagtagaagactcactgatcaattttaaacgtcaattaaagggcggatgtgatcataacattacattatctaacag cacaatccacaatggtatgtccagatcatccacaaagatgaagcgatctgctaatataggatcagatctttacttcagtg ctaaagtgtccaccattcttctttgtccacagatccaacttgacgacgatgaatataacatcagtcacagcgcctctagt ctctccttaacacgtgaaggatttcaaaatatttcatttgatgattttgcctttacaccggatgggaaaatgagagtatg tcttaatgacctacagcagattcattatcttcccattcagagaacagcaattagtgtccttacggattggaagcaaaaat atttatggatcatatctttggttgcatcaattatttctatcattagtcttagtataggtcttataatttattctatgttt ccaagtttacgttccataccaggatcagatctttacttcagtgctaaagtgtccaccattcttctttgtccacagatcca acttgacgacgatgaatataacatcagtcacagcgcctctagtctgtctttaacacgtgaaggatttcaaaatatttcat ttgatgattttgcctttacgccggatgggaaaatgagaaacacactagctattgagtctttgcggaaaacagagttatct accattggagatgttgtagctgaattgagcagtgctggaaagaaaggctgtatctcgggaactgaatactacaacaatgg atatggagagggctggccaatatccagacaaatcaagttcccgacattattcgatgacttgccaattatttccatcagta taacgcacatagatgtatcaaataattccaatgttcgcgtcgtgataaacactactaactcgaccaggtcaggattcagt cttcacatgggaacatggtcagagaccaagttgtttgctgtaaaatgtaactggatggcatgttcaaaattaaactag |
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Protein
| Protein ID | pfu_aug2.0_88.1_26818.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_88.1_26818.t1 MKERRGSPTRPDIDSKTSIQSEKAEKTYTARDTKGQGTAKTTSKYQAQKTTHKPTRPMGQRCRLRTAICQNRKIKHKRRK IKSALESYKRLRFSCGCLGADARFLKASLGVCKPFHLVQLRTIINGRYEKDQTEQYSALMVDSCPVGSSKELKEKCSSLN DTKSRLKHYPVTGNELPLTFYNIFCAKCNNVLNFTSWSLDINCSLFADFNYLTTLDEVVDLAIERRCIFQAYKKDDEFGE SKEENCFDIDGSQTIITKCNQTSEWIVYDGNIAYACESFFKGNYRFFKNVFCYMCNPSGHEFMTNTIATCNVTGEWLIQD SGLQQACTDLPMSFSTAPFKNIFCYLCNRGNDSSHMFVDIMGKVNEFPIEDIYFHFQYDLYIADFNLQYFMHNSLKRTKK EKQLGDFIRTPFDISSFMINNGSYINMTNLLLQNAAIDGSISVCKSRRSVFPKGYGDGECKCDILCFYGKYSPWVSCCSD LALQIPFHCQDILDLSHAAFPRSKKRGFLTINGCFQETTLKLIRLGCALPEDNDIFSTIPLNEANGINYDNLYCILCNFE SDKLLRKMQGIIDLSNSSINETNSGSDNHINQLIEVYKSRKDSFTIWNLEMGLCRNITCYSGKYFDGENCKPLMAITMNL RYSMTVKIGLYTFDESNSYLMLPESPTYVQQTLDELLSYNGGNSLQNFKGIEGFDGGPGVSKAICLTIDFDIYFKSSVSR IQVEDSLINFKRQLKGGCDHNITLSNSTIHNGMSRSSTKMKRSANIGSDLYFSAKVSTILLCPQIQLDDDEYNISHSASS LSLTREGFQNISFDDFAFTPDGKMRVCLNDLQQIHYLPIQRTAISVLTDWKQKYLWIISLVASIISIISLSIGLIIYSMF PSLRSIPGSDLYFSAKVSTILLCPQIQLDDDEYNISHSASSLSLTREGFQNISFDDFAFTPDGKMRNTLAIESLRKTELS TIGDVVAELSSAGKKGCISGTEYYNNGYGEGWPISRQIKFPTLFDDLPIISISITHIDVSNNSNVRVVINTTNSTRSGFS LHMGTWSETKLFAVKCNWMACSKLN |
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