Gene
| Gene Model ID | pfu_aug2.0_88.1_26820 |
|---|---|
| Locus | scaffold88.1 : 164566 ... 190530 : + |
| To GenomeBrowser | scaffold88.1:164566..190530 |
| Genes list of scaffold | scaffold88.1 |
| Synonym | pfu_aug1.0_648.1_15164 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_88.1_26820.t1 | 6 | 1 | Kelch_3 | 21 | 35 | 1.2e-21 | 76.2 | 6.0 | 15000.0 | -4.0 |
| pfu_aug2.0_88.1_26820.t1 | 7 | 1 | Kelch_5 | 25 | 59 | 3.8e-23 | 80.9 | 1.3e-09 | 3.3e-06 | 26.9 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 1 | Kelch_6 | 29 | 69 | 1.4e-24 | 85.1 | 1.4e-10 | 3.4e-07 | 30.1 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 1 | Kelch_1 | 29 | 69 | 8.4e-24 | 82.8 | 1.9e-15 | 4.7e-12 | 45.2 |
| pfu_aug2.0_88.1_26820.t1 | 5 | 1 | Kelch_4 | 29 | 74 | 2.4e-23 | 81.6 | 1.6e-09 | 4.0e-06 | 26.4 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 1 | Kelch_2 | 29 | 71 | 2.5e-14 | 52.3 | 2.4e-06 | 0.0059 | 16.3 |
| pfu_aug2.0_88.1_26820.t1 | 6 | 2 | Kelch_3 | 38 | 74 | 1.2e-21 | 76.2 | 2.4e-07 | 0.00059 | 19.9 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 2 | Kelch_6 | 81 | 113 | 1.4e-24 | 85.1 | 0.018 | 44.0 | 4.4 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 2 | Kelch_1 | 81 | 112 | 8.4e-24 | 82.8 | 0.16 | 400.0 | 0.6 |
| pfu_aug2.0_88.1_26820.t1 | 5 | 2 | Kelch_4 | 81 | 125 | 2.4e-23 | 81.6 | 4.5e-05 | 0.11 | 12.2 |
| pfu_aug2.0_88.1_26820.t1 | 7 | 2 | Kelch_5 | 81 | 112 | 3.8e-23 | 80.9 | 0.0023 | 5.7 | 7.0 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 2 | Kelch_2 | 81 | 109 | 2.5e-14 | 52.3 | 0.011 | 26.0 | 4.7 |
| pfu_aug2.0_88.1_26820.t1 | 6 | 3 | Kelch_3 | 91 | 138 | 1.2e-21 | 76.2 | 0.00028 | 0.68 | 10.1 |
| pfu_aug2.0_88.1_26820.t1 | 7 | 3 | Kelch_5 | 129 | 162 | 3.8e-23 | 80.9 | 2.7e-09 | 6.6e-06 | 25.9 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 3 | Kelch_6 | 132 | 173 | 1.4e-24 | 85.1 | 6.8e-07 | 0.0017 | 18.4 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 3 | Kelch_1 | 132 | 171 | 8.4e-24 | 82.8 | 2.5e-07 | 0.00063 | 19.2 |
| pfu_aug2.0_88.1_26820.t1 | 5 | 3 | Kelch_4 | 132 | 171 | 2.4e-23 | 81.6 | 7.6e-08 | 0.00019 | 21.1 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 3 | Kelch_2 | 132 | 172 | 2.5e-14 | 52.3 | 1.7e-08 | 4.1e-05 | 23.1 |
| pfu_aug2.0_88.1_26820.t1 | 6 | 4 | Kelch_3 | 141 | 192 | 1.2e-21 | 76.2 | 9.5e-08 | 0.00024 | 21.1 |
| pfu_aug2.0_88.1_26820.t1 | 7 | 4 | Kelch_5 | 182 | 204 | 3.8e-23 | 80.9 | 4.5e-05 | 0.11 | 12.4 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 4 | Kelch_2 | 185 | 220 | 2.5e-14 | 52.3 | 0.0025 | 6.2 | 6.7 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 4 | Kelch_6 | 186 | 227 | 1.4e-24 | 85.1 | 1.5e-09 | 3.6e-06 | 26.8 |
| pfu_aug2.0_88.1_26820.t1 | 4 | 4 | Kelch_1 | 186 | 224 | 8.4e-24 | 82.8 | 3.5e-05 | 0.086 | 12.3 |
| pfu_aug2.0_88.1_26820.t1 | 5 | 4 | Kelch_4 | 186 | 226 | 2.4e-23 | 81.6 | 1.3e-06 | 0.0032 | 17.1 |
| pfu_aug2.0_88.1_26820.t1 | 6 | 5 | Kelch_3 | 196 | 243 | 1.2e-21 | 76.2 | 1.7e-08 | 4.1e-05 | 23.6 |
| pfu_aug2.0_88.1_26820.t1 | 7 | 5 | Kelch_5 | 232 | 244 | 3.8e-23 | 80.9 | 0.028 | 70.0 | 3.5 |
| pfu_aug2.0_88.1_26820.t1 | 5 | 5 | Kelch_4 | 235 | 244 | 2.4e-23 | 81.6 | 0.52 | 1300.0 | -0.8 |
| pfu_aug2.0_88.1_26820.t1 | 7 | 6 | Kelch_5 | 544 | 555 | 3.8e-23 | 80.9 | 1.2 | 3000.0 | -1.7 |
| pfu_aug2.0_88.1_26820.t1 | 7 | 7 | Kelch_5 | 699 | 710 | 3.8e-23 | 80.9 | 0.12 | 300.0 | 1.5 |
| pfu_aug2.0_88.1_26820.t1 | 6 | 6 | Kelch_3 | 699 | 708 | 1.2e-21 | 76.2 | 0.59 | 1500.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_88.1_26820.t1 | gi|676478038|ref|XP_009061305.1| | hypothetical protein LOTGIDRAFT_166011 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_88.1_26820.t1 | gi|242008513|ref|XP_002425048.1| | kelch repeat domain, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_88.1_26820.t1 | gi|585642963|ref|XP_006811269.1| | PREDICTED: uncharacterized protein LOC102810221 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_88.1_26820.t1 | gi|641670845|ref|XP_008185371.1| | PREDICTED: tip elongation aberrant protein 1-like [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_88.1_26820.t1 | gi|759041207|ref|XP_011329415.1| | PREDICTED: uncharacterized protein LOC105274747 isoform X1 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_88.1_26820.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_88.1_26820.t1 atgcagaataaagtttcagggttatcaatactctttagatggaatgcattaaaagtaacccccagtaaaacgtttccaag atccagatgtcgtcatgctgcctgtatccatggagattatgtatacataattggagggaaggatgggcatgtgtccctta aagatgtgtggcggtttcatataggaaatgctgagtgggagaagttaaaccttcagggagatagacttccattcttggaa ggacataccgtggtgtcacataagaggctgttgttactgtttggaggggcgtttggtgatgatctaacagactcggctct atggattctgaatccagaccttaagcatgtcaggaagttacactgtgatttgggttctccccaaccgtccaccaggcggc agcattcagccgtcctacataataacgtcatgtatatatacggagggtacatagacctgaagggatccagctcagaactt tgggctttccatatagaagaggaggagtgggagttaattctacagcatcagaggtcagaggacacgccgggcggtcgtca tggacacagtgctgtcatgtacggacgtgacatgtggatgtttggaggagcatgtgaccttaatcccaaggctgacctct ggtactttaacctacgatcccttagatggagtcacatacagctgtcaggagttactccccctcccaggatgtggcattcc ttagtggtcttgacctcagccaactttccaaagggagaaaactctgtcaggacaagttctttgccatatttacagaacaa aggcacccatcatagacagcgtcgacctaaatccagcccagcatattcatccgatagaggcagtcgtaggcaaagacggg acgagtctcgaggagaaaggaagacagagaacagtgatcctaggtcttttaaatatggacggttagaaaatgcatcaagt tcagaatcatctaattcagttcatgatagtgcgcatgttgcagataaagaaataagtgttcaatcagaggaaatgaaaaa tgttccaaaaaggccaaatcaactggacattggtgtaccaagagtaaggccaaattctgatggattacctgttgtcatga caacacctacggtaaaggtgaaggaagagaaatccccgttattggcagatcgccaaatatcaacagctagtatggattca acaggaagtttacaggggactgacaatccgtgcttgagtctttcaaatgatgtgataaatgaagcgcatgaaagtagttt ttcatttgggccaaaaccggaaagcagatatttaaaaaggggtcagaggtcaaggtcaaggtcgacgaatgattctgatg tcatgattcctatggacaccattccaaagactgtgatacaagtcaaaccttattctgcaagtcacaggttaaatctctac aaatcagggaagcaagacattgtaatagaagacttagaattttgtgagaaccattttgaatccaattcttcgaacaagtc agtaagaaaacttagtgctagagatatggtctccattctcagggatcaagaaaatacattaaatactgaaagagggatag aacttacaaacaaaggcaaaaaacacaagttgcctacacagcttactcagttcacaagtgctaaatcccagtctctaagt gatttacattccgcacacggatatgaaatggctcatataaggaacgggtctatcagttcaagggacgacaatgatatcgg ggtcacaatgagatgttgggaatccccagtgtccgacacccccaccttaacacagagtgcatcagaactttctactttat ctggtggcagctacctgagcacaaatgtttccatcaccgattcatcttttactactgtgtctccgtccagcattagctca aataccaatcccagtgttatccaaacgaagaatgctcagtcaaatagccgtgaatcattgtttcttgccaaaccaaactc tacagacactatgccaaacataccaaataaagatgtcaaacctcaggtaagaaacaaaccaaataaagatgtcaaacctc agaatattactccatatctgttactgtttgggggtaaggaaggaaggggaagtaacctgaagttagagcccatcagtgta tggaaatgtgatatactgtctcgtcatagtgatatatcacacggggaataccataagcatgtaggcatatatttgacttg ctag |
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Protein
| Protein ID | pfu_aug2.0_88.1_26820.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_88.1_26820.t1 MQNKVSGLSILFRWNALKVTPSKTFPRSRCRHAACIHGDYVYIIGGKDGHVSLKDVWRFHIGNAEWEKLNLQGDRLPFLE GHTVVSHKRLLLLFGGAFGDDLTDSALWILNPDLKHVRKLHCDLGSPQPSTRRQHSAVLHNNVMYIYGGYIDLKGSSSEL WAFHIEEEEWELILQHQRSEDTPGGRHGHSAVMYGRDMWMFGGACDLNPKADLWYFNLRSLRWSHIQLSGVTPPPRMWHS LVVLTSANFPKGENSVRTSSLPYLQNKGTHHRQRRPKSSPAYSSDRGSRRQRRDESRGERKTENSDPRSFKYGRLENASS SESSNSVHDSAHVADKEISVQSEEMKNVPKRPNQLDIGVPRVRPNSDGLPVVMTTPTVKVKEEKSPLLADRQISTASMDS TGSLQGTDNPCLSLSNDVINEAHESSFSFGPKPESRYLKRGQRSRSRSTNDSDVMIPMDTIPKTVIQVKPYSASHRLNLY KSGKQDIVIEDLEFCENHFESNSSNKSVRKLSARDMVSILRDQENTLNTERGIELTNKGKKHKLPTQLTQFTSAKSQSLS DLHSAHGYEMAHIRNGSISSRDDNDIGVTMRCWESPVSDTPTLTQSASELSTLSGGSYLSTNVSITDSSFTTVSPSSISS NTNPSVIQTKNAQSNSRESLFLAKPNSTDTMPNIPNKDVKPQVRNKPNKDVKPQNITPYLLLFGGKEGRGSNLKLEPISV WKCDILSRHSDISHGEYHKHVGIYLTC |
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