Gene
Gene Model ID | pfu_aug2.0_883.1_11267 |
---|---|
Locus | scaffold883.1 : 80300 ... 103885 : - |
To GenomeBrowser | scaffold883.1:80300..103885 |
Genes list of scaffold | scaffold883.1 |
Synonym | pfu_aug1.0_156.1_22033 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_883.1_11267.t1 | 1 | 1 | GCV_H | 79 | 133 | 9.4e-07 | 28.5 | 8.4e-11 | 1.2e-06 | 28.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_883.1_11267.t1 | gi|667313389|ref|XP_008585417.1| | PREDICTED: protein Simiate [Galeopterus variegatus] | 4.0e-32 |
pfu_aug2.0_883.1_11267.t1 | gi|617563369|ref|XP_007516244.1| | PREDICTED: protein FAM206A [Erinaceus europaeus] | 9.0e-32 |
pfu_aug2.0_883.1_11267.t1 | gi|557276911|ref|XP_006021568.1| | PREDICTED: protein FAM206A [Alligator sinensis] | 1.0e-31 |
pfu_aug2.0_883.1_11267.t1 | gi|554530093|ref|XP_005859846.1| | PREDICTED: uncharacterized protein LOC102239654 [Myotis brandtii] | 1.0e-31 |
pfu_aug2.0_883.1_11267.t1 | gi|632959674|ref|XP_007895759.1| | PREDICTED: protein FAM206A [Callorhinchus milii] | 1.0e-31 |
Transcript
Transcript ID | pfu_aug2.0_883.1_11267.t1 |
---|---|
Definition | - |
>pfu_aug2.0_883.1_11267.t1 atgatggcagtcgacggagaaagcaaaaggaaacgtgaaactgtagttgagcggtattattctccaaaatatgtacttga ttctggtggaaagaaaaacgaagatctttgtattttattgcattcaaatagattagagaacaaagtatccgggaaaggta aaagaggtgcccaagtcttgaacctgtcgtcctcattgtgcaatgtgacttgtaaagatggagagaaatatactatacga tgtggaatcaaagggcaactagtggaagttaatgaaaatctagtgacaaatccagatctgattacaaaaaaaccacagtc ggatgggttcatcgcaatagttttgccgaaattgaaggagtatgaacaaatgaccaagaatttaattacacaggcgacct ttgatacaactcgccgatctttaacaagtacttaa |
Protein
Protein ID | pfu_aug2.0_883.1_11267.t1 |
---|---|
Definition | - |
>pfu_aug2.0_883.1_11267.t1 MMAVDGESKRKRETVVERYYSPKYVLDSGGKKNEDLCILLHSNRLENKVSGKGKRGAQVLNLSSSLCNVTCKDGEKYTIR CGIKGQLVEVNENLVTNPDLITKKPQSDGFIAIVLPKLKEYEQMTKNLITQATFDTTRRSLTST |