Gene
| Gene Model ID | pfu_aug2.0_883.1_11267 |
|---|---|
| Locus | scaffold883.1 : 80300 ... 103885 : - |
| To GenomeBrowser | scaffold883.1:80300..103885 |
| Genes list of scaffold | scaffold883.1 |
| Synonym | pfu_aug1.0_156.1_22033 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_883.1_11267.t1 | 1 | 1 | GCV_H | 79 | 133 | 9.4e-07 | 28.5 | 8.4e-11 | 1.2e-06 | 28.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_883.1_11267.t1 | gi|667313389|ref|XP_008585417.1| | PREDICTED: protein Simiate [Galeopterus variegatus] | 4.0e-32 |
| pfu_aug2.0_883.1_11267.t1 | gi|617563369|ref|XP_007516244.1| | PREDICTED: protein FAM206A [Erinaceus europaeus] | 9.0e-32 |
| pfu_aug2.0_883.1_11267.t1 | gi|557276911|ref|XP_006021568.1| | PREDICTED: protein FAM206A [Alligator sinensis] | 1.0e-31 |
| pfu_aug2.0_883.1_11267.t1 | gi|554530093|ref|XP_005859846.1| | PREDICTED: uncharacterized protein LOC102239654 [Myotis brandtii] | 1.0e-31 |
| pfu_aug2.0_883.1_11267.t1 | gi|632959674|ref|XP_007895759.1| | PREDICTED: protein FAM206A [Callorhinchus milii] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_883.1_11267.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_883.1_11267.t1 atgatggcagtcgacggagaaagcaaaaggaaacgtgaaactgtagttgagcggtattattctccaaaatatgtacttga ttctggtggaaagaaaaacgaagatctttgtattttattgcattcaaatagattagagaacaaagtatccgggaaaggta aaagaggtgcccaagtcttgaacctgtcgtcctcattgtgcaatgtgacttgtaaagatggagagaaatatactatacga tgtggaatcaaagggcaactagtggaagttaatgaaaatctagtgacaaatccagatctgattacaaaaaaaccacagtc ggatgggttcatcgcaatagttttgccgaaattgaaggagtatgaacaaatgaccaagaatttaattacacaggcgacct ttgatacaactcgccgatctttaacaagtacttaa |
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Protein
| Protein ID | pfu_aug2.0_883.1_11267.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_883.1_11267.t1 MMAVDGESKRKRETVVERYYSPKYVLDSGGKKNEDLCILLHSNRLENKVSGKGKRGAQVLNLSSSLCNVTCKDGEKYTIR CGIKGQLVEVNENLVTNPDLITKKPQSDGFIAIVLPKLKEYEQMTKNLITQATFDTTRRSLTST |
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