Gene
| Gene Model ID | pfu_aug2.0_883.1_11269 |
|---|---|
| Locus | scaffold883.1 : 115066 ... 153237 : + |
| To GenomeBrowser | scaffold883.1:115066..153237 |
| Genes list of scaffold | scaffold883.1 |
| Synonym | pfu_aug1.0_28636.1_04645 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_883.1_11269.t1 | 1 | 1 | AAA_16 | 385 | 527 | 1.0e-06 | 28.8 | 7.9e-09 | 1.5e-05 | 25.1 |
| pfu_aug2.0_883.1_11269.t1 | 1 | 1 | NACHT | 407 | 575 | 6.5e-15 | 55.1 | 9.1e-18 | 1.7e-14 | 53.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_883.1_11269.t1 | gi|676496552|ref|XP_009067252.1| | hypothetical protein LOTGIDRAFT_135306 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_883.1_11269.t1 | gi|350397849|ref|XP_003485009.1| | 0.0 | |
| pfu_aug2.0_883.1_11269.t1 | gi|340724364|ref|XP_003400552.1| | PREDICTED: NACHT and WD repeat domain-containing protein 2 [Bombus terrestris] | 0.0 |
| pfu_aug2.0_883.1_11269.t1 | gi|383854965|ref|XP_003702990.1| | 0.0 | |
| pfu_aug2.0_883.1_11269.t1 | gi|524908317|ref|XP_005109260.1| | PREDICTED: leucine-rich repeat and WD repeat-containing protein KIAA1239-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_883.1_11269.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_883.1_11269.t1 atggcgaccgacccgactaacatgtcagatggtactggatctgaggcgggggcggacgtcgatacagaggagcaggagaa gctccagagggtgttgtcggggtccctacagaatttacctcccctcagctcgaagattgtcaggatctttactagttcca ccttcacagatactacaatagaaagaaatgctttgatggagaatgtataccccaagatcaaagaatacctcagagagaga tatggtctagaatttcaggtggtggacatgagatggggagtccgggacgaggccacagatgatcacatgaccactgccct ctgtatgcaggagatagacaactgtcaacggctgtccatcggacctaactttgtcgttttcctaggacaaaagtatggct accgacctctccctactcacatagatgcctccgaattcgagatgatccgagagtgtgtccgagatgttcctaacgagatc gaggctctggacatgtggtacaggaaagactgtaataaagtcccgcctgtttatattttacaaccaatcagctccatcct tacaaatttcaacaacaagagacaccagcgacttcaggagcaggaccagaacacctggtgggacaccttccttaaactac aacgtatcatgcggaaagccgcccaagtactcttcattaccaagaaaatagacaaagaacaaatgcataactactttatg tcagtgacagaaagagaggtggaaagagggattcttaaagcagacgacactctcaaccactgcttggcatatgtgcggga aattagcaatatcaatctcacactgctgaggtttgcctccaaattcattgactttgctgccagaaatgtagacggcgagg cacagaaatttctaaaaactctaagagacgagaaactccctaaaagaataccagactcaaatttggcgcgttttatcgtc gaatggggaggcaaagaaggcatcgatcccgaaactcacaaagaatacttgattcaattccaagaacatttctacaagag catcatcggtcttgtagacagagcgatggagaaatatgagaaactgtcctcagatcctgtgttctcagaggcattacagc atctacacgcgtgtctgaagttctgtagagtctttcaaggccgtgaagatattgtggagaagatccatcagtatgtgctg gggacgtctgataagccatttgtattacacggtgaaagtggctgtgggaaaacgtcacttactgcaaaaggagctagtca gatgaaagagtggtttccagaggacagggagcctgttctagtgataaggtttcttggtaccacaccaaacagttctagca ttatccctctgcttgtaaatctgtgtacccacattgccatggtatatgaccagcctttagatgaggtcccagacgagtta tcgcccctggtgaatcactttaagaagcttctagcatgtgccactgaggaaaagccactagttgtaattctagactccct ggatcagttgtctgggtctgacggcgctcatgcattggcatggctacccaccacacttccaccgaatgtccgtctgcttg tctctacgctgccacggatgtacaacatactagacactctgaacttgttgattgaggacaaagataactacgtccaagtc ttgcctttaggagaaaatctcagtggcacaatcttgaagttctggttgaaaaacggaaatagaaccgttagcgatgaaca atgggaaattgtaaacgaagccataacaaaatgtaatcttcccctctatgtgaaacttgtctttgacgaaatctgcagat ggaagtcgtatacaccactcaaacaaactcagcttgcattcacaatacatgacttgatcatgaaactattcgaaagaatc gaaattcagcatgggaagactttggttgcacatgcattaggatacatcacggctgctaaaagtggaatatccgagtcaga acttgaagacttgctgtcgctggatgagcgagtactgaatgatgtctaccagtatcatttaccgngacggcgctcatgca ttggcatggctacccaccacacttccaccgaatgagaaaatctcagtggcacaatcttgaagttctggttgaaaaacgga aatagaaccgttagcgatgaacaatgggaaattgtaaacgaagccataacaaaatgtaatcttcccctctatgtgaaact tgtctttgacgaaatctgcagatggaagtcgtatacaccactcaaacaaactcagcttgcattcacaatacatgacttga tcatgaaactattcgaaagaatcgaaattcagcatgggaagactttggttgcacatgcattaggatacatcacggctgct aaaagtggaatatccgagtcagaacttgaagacttgctgtcgctggatgagcgagtactgaatgatgtctaccagtatca tttaccgccagttcgtagaattccaccattgttgtggacaaggatccgtagtgatctaccaggatacctgagtgaaagag aggcagatgctgtcaatgttatcaattggtaccacaggcaatttatagaggctgctcatgagcgatatttcagaaatttg aactttgttagtctgatgcatgcaaatttagctgaatactttctaggaatttggggtggtggtataccaaaaccttttga atattcagagcaccaaaggaggatgtttcacctctcagacttgaaaggtgaaagtgatcgcaaagttcctcaacaacctg tggttttccaaaacgaagaaggaaacgttattagacacaatttacgaaaactgaatgaacttccctatcatctcatcagg tcccatcaatatgaggaactgtatacaaattgtttattcaattatgacttcttacatgcaaagttgagctcaatgccact tcagagtgtactagtagattttgaggatcttctagaacatgtttatcagaaggatgctaaactgatagcagatgccatac gtctttccagttcagttctgagccactaccctgacatgttgggaccacaaatcatcggtaggcttttaccttactatcaa caaaacacaaatatcagaagtctgattcagcaatgtgacagtgatggtcttgaatactgtgctctcgtgcctacccacca ttgtctacataccccaggtggacctctacagtactcacttgagggacatccttttgcaccttttggaatttccccaacat caaacggcaaatatctggtctccgtctccaacaagtttattatctgggacttgagaacaggtgaaattttccgaacggtc gtgcttggaatcactggcattatgcaaaatctagtcatttcagagaacgacaaatatgcggctagttatacgaataataa tcaagtgatcgtctgcaccattatgactggtgacttcangacatcaaacggaaaatatctggtctccgtctccaacaagt ttattatctgggacttgagaacaggtgaaattttccgaacggtcgtgcttggaatcactggcattatgcaaaatctagtc atttcagagaatgacaaatatgcggctagttatacgaataataatcaagtgatcgtctgcaccattatgactggtgactt cacaatcataagcccaatggttaacggtaaaacagagtcaataatcggcacttgtatctcacttacgcacgtggcaatgt ggactgcaaacgaatggttcttgtacacggtcgctggaaagttcgtctctactttcaaaacagatttgaagatgcctttg atgaacgtagaatttggagaagatggtcttacctatctcattgtgaagagtggtgcagattcggataccgacatggcttt agaagtcgccgataaatcagtggaaccgtttgagttccacagtgcagttgctgtcgcgaaggacaagtccgtagtgtatg gctgcatagcgattagtgacaatgctgtagctgtatataaacgcgaggaaaacgtttggaagtacgatcgaacactgggt gataattatgaccgcgtattctcactcaccctatcttttgatgaaaattacttggtcgcaacgatcgctcttggattcaa actttggaatctgaaaaatgattctttggtacaactcaaacttcctccaggaactagaaatattccgaataaaaatcctc tattgtccgtggttgtgttcacaaagaacaatcattttgtagtggctgctgtcagaaagaacttatacgtttgggatacg aaacaagggaatatggtgaaagttttggacgctcatttcggtagaatcatagcattgggcgctgttacgtctnccttccc tgaaggggaagatgtgtatatgatagaatacaccttcaagaaatttcgaaaaggagcgatcacgaaagagggaacgttcc tagctatacctgcctctgacaaaagcggagatgtgttaggagtgtaccatgcgaaaaatggtacacatttgtacaatctg caactgaagtacgcaaattataaagaacttaccagcgtgctggctatgccgcatgatacaaaccaagtagtcgttgttga cgatgaaaagggcaatgtgctagacttgaaaaagaaaacactagtgaggtccgtcatgcgatggaacggcatgaccatga aaactggcaagcatggtctgttcgcgccatcaagaggtggccttgaacttttggaattgaaaacaggaaagacaactcga acatttattcctcgcgttgcagaaggagtgttcagtatagatgtcatgtttaccaagaatgataaacacgtggtctatta tcattctggacataggacaattcgtgttttcagagtttcggatggcaaacgaattgctaattttaaggcgcatgcggaag tgacgtacatgacgggaacaacggaaggggaaactctcgttataggggcggtagacggaagttttaccgtattgacaatt gctgatcctgaatatgaagagaatgtggaattcttgaaaaatcttccaagtcgacgagttcaaaagggtacgactcaaaa tggttacgtaacaaccacaaatgcaaacggggaggtggttaatttggtaacagggaagaacagtatgggaacggcattgc aagtagcgcgttttgtcgcaaaagcgcgtggtgcacaacgatcaagagcctgtgtgatatcataa |
|
Protein
| Protein ID | pfu_aug2.0_883.1_11269.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_883.1_11269.t1 MATDPTNMSDGTGSEAGADVDTEEQEKLQRVLSGSLQNLPPLSSKIVRIFTSSTFTDTTIERNALMENVYPKIKEYLRER YGLEFQVVDMRWGVRDEATDDHMTTALCMQEIDNCQRLSIGPNFVVFLGQKYGYRPLPTHIDASEFEMIRECVRDVPNEI EALDMWYRKDCNKVPPVYILQPISSILTNFNNKRHQRLQEQDQNTWWDTFLKLQRIMRKAAQVLFITKKIDKEQMHNYFM SVTEREVERGILKADDTLNHCLAYVREISNINLTLLRFASKFIDFAARNVDGEAQKFLKTLRDEKLPKRIPDSNLARFIV EWGGKEGIDPETHKEYLIQFQEHFYKSIIGLVDRAMEKYEKLSSDPVFSEALQHLHACLKFCRVFQGREDIVEKIHQYVL GTSDKPFVLHGESGCGKTSLTAKGASQMKEWFPEDREPVLVIRFLGTTPNSSSIIPLLVNLCTHIAMVYDQPLDEVPDEL SPLVNHFKKLLACATEEKPLVVILDSLDQLSGSDGAHALAWLPTTLPPNVRLLVSTLPRMYNILDTLNLLIEDKDNYVQV LPLGENLSGTILKFWLKNGNRTVSDEQWEIVNEAITKCNLPLYVKLVFDEICRWKSYTPLKQTQLAFTIHDLIMKLFERI EIQHGKTLVAHALGYITAAKSGISESELEDLLSLDERVLNDVYQYHLPXRRSCIGMATHHTSTEXENLSGTILKFWLKNG NRTVSDEQWEIVNEAITKCNLPLYVKLVFDEICRWKSYTPLKQTQLAFTIHDLIMKLFERIEIQHGKTLVAHALGYITAA KSGISESELEDLLSLDERVLNDVYQYHLPPVRRIPPLLWTRIRSDLPGYLSEREADAVNVINWYHRQFIEAAHERYFRNL NFVSLMHANLAEYFLGIWGGGIPKPFEYSEHQRRMFHLSDLKGESDRKVPQQPVVFQNEEGNVIRHNLRKLNELPYHLIR SHQYEELYTNCLFNYDFLHAKLSSMPLQSVLVDFEDLLEHVYQKDAKLIADAIRLSSSVLSHYPDMLGPQIIGRLLPYYQ QNTNIRSLIQQCDSDGLEYCALVPTHHCLHTPGGPLQYSLEGHPFAPFGISPTSNGKYLVSVSNKFIIWDLRTGEIFRTV VLGITGIMQNLVISENDKYAASYTNNNQVIVCTIMTGDFXTSNGKYLVSVSNKFIIWDLRTGEIFRTVVLGITGIMQNLV ISENDKYAASYTNNNQVIVCTIMTGDFTIISPMVNGKTESIIGTCISLTHVAMWTANEWFLYTVAGKFVSTFKTDLKMPL MNVEFGEDGLTYLIVKSGADSDTDMALEVADKSVEPFEFHSAVAVAKDKSVVYGCIAISDNAVAVYKREENVWKYDRTLG DNYDRVFSLTLSFDENYLVATIALGFKLWNLKNDSLVQLKLPPGTRNIPNKNPLLSVVVFTKNNHFVVAAVRKNLYVWDT KQGNMVKVLDAHFGRIIALGAVTSXFPEGEDVYMIEYTFKKFRKGAITKEGTFLAIPASDKSGDVLGVYHAKNGTHLYNL QLKYANYKELTSVLAMPHDTNQVVVVDDEKGNVLDLKKKTLVRSVMRWNGMTMKTGKHGLFAPSRGGLELLELKTGKTTR TFIPRVAEGVFSIDVMFTKNDKHVVYYHSGHRTIRVFRVSDGKRIANFKAHAEVTYMTGTTEGETLVIGAVDGSFTVLTI ADPEYEENVEFLKNLPSRRVQKGTTQNGYVTTTNANGEVVNLVTGKNSMGTALQVARFVAKARGAQRSRACVIS |
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