Gene
| Gene Model ID | pfu_aug2.0_885.1_17908 |
|---|---|
| Locus | scaffold885.1 : 159755 ... 182176 : + |
| To GenomeBrowser | scaffold885.1:159755..182176 |
| Genes list of scaffold | scaffold885.1 |
| Synonym | pfu_aug1.0_10712.1_31966 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nadh dehydrogenase | GO:0051536 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_885.1_17908.t1 | 1 | 1 | 2Fe-2S_thioredx | 137 | 262 | 0.0 | 177.1 | 0.0 | 0.0 | 176.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_885.1_17908.t1 | gi|524871774|ref|XP_005092658.1| | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_885.1_17908.t1 | gi|676494339|ref|XP_009066530.1| | hypothetical protein LOTGIDRAFT_211364 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_885.1_17908.t1 | gi|260797853|ref|XP_002593915.1| | hypothetical protein BRAFLDRAFT_115771 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_885.1_17908.t1 | gi|663247402|ref|XP_008503804.1| | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Calypte anna] | 0.0 |
| pfu_aug2.0_885.1_17908.t1 | gi|723138215|ref|XP_010285884.1| | PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial, partial [Phaethon lepturus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_885.1_17908.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_885.1_17908.t1 atggtttgcccagcacggccaccgaacgataaagaatacgaacagacaagcacagcggggagaggcgcaaaagggacaag gaacgtcaacgcacaacacagaaacatcaaacacaaaggactacacataaaccaacgagaccaatgggcaaccggtgccg acttaggacggccatctgccacggaaattagcagaagtagcgtatccggtttgcagtttacaagttacatgcagtgtccg tcattttcaaggatgattcgaagtgcatgtcaacagttagtttcttccgtgtcacggcagattcgtggatttcatcagac aacagtagcatatggaggccagttatttgtgcacagggattcccctgagaataatgctaacacgccattcaaattcacag atgaaaatctgaagaggcaacatggatggctgcccatctctgccatgcatgaagtggcaaagattctcaaaatgccaaaa atacgagtttatgaagtagctacattttataccatgttcaataggaagccagtaggtaaatactttgttcagatctgtac gaccacaccctgtatgttagggggcgtaggatctgacgtcatactggacgccatcaaagaaaatctgggtataaatgtag gggagacgactccagataacatgtttaccctgatagaagtggagtgtttaggagcgtgtgtgaatgctcctatggtacag atcaacgataattattacgaggaccttacagtagatgatatgcatagaattctcaatgacataaagaaaggagtaatgcc aaaagcagggcctcagagtggtcagaatcacaggtatgcagcggagccaaaagaggggctgacctgcctcacagaggaac caaaaggaccgggcttcggggttaggcctgacctatga |
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Protein
| Protein ID | pfu_aug2.0_885.1_17908.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_885.1_17908.t1 MVCPARPPNDKEYEQTSTAGRGAKGTRNVNAQHRNIKHKGLHINQRDQWATGADLGRPSATEISRSSVSGLQFTSYMQCP SFSRMIRSACQQLVSSVSRQIRGFHQTTVAYGGQLFVHRDSPENNANTPFKFTDENLKRQHGWLPISAMHEVAKILKMPK IRVYEVATFYTMFNRKPVGKYFVQICTTTPCMLGGVGSDVILDAIKENLGINVGETTPDNMFTLIEVECLGACVNAPMVQ INDNYYEDLTVDDMHRILNDIKKGVMPKAGPQSGQNHRYAAEPKEGLTCLTEEPKGPGFGVRPDL |
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