Gene
| Gene Model ID | pfu_aug2.0_887.1_24495 |
|---|---|
| Locus | scaffold887.1 : 167467 ... 179305 : - |
| To GenomeBrowser | scaffold887.1:167467..179305 |
| Genes list of scaffold | scaffold887.1 |
| Synonym | pfu_aug1.0_10295.1_24713 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_887.1_24495.t1 | 2 | 1 | Prenyltrans_1 | 59 | 74 | 7.2e-06 | 25.9 | 0.0043 | 16.0 | 5.5 |
| pfu_aug2.0_887.1_24495.t1 | 3 | 1 | Cobalamin_bind | 83 | 125 | 6.4e-20 | 71.0 | 0.067 | 250.0 | 0.0 |
| pfu_aug2.0_887.1_24495.t1 | 3 | 2 | Cobalamin_bind | 131 | 324 | 6.4e-20 | 71.0 | 3.2e-23 | 1.2e-19 | 70.1 |
| pfu_aug2.0_887.1_24495.t1 | 2 | 2 | Prenyltrans_1 | 217 | 262 | 7.2e-06 | 25.9 | 1.9e-06 | 0.0071 | 16.3 |
| pfu_aug2.0_887.1_24495.t1 | 3 | 3 | Cobalamin_bind | 411 | 434 | 6.4e-20 | 71.0 | 0.72 | 2700.0 | -3.4 |
Transcript
| Transcript ID | pfu_aug2.0_887.1_24495.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_887.1_24495.t1 atggcagatactaaaaaatcccaaagtaccaagcgcctagagttgtgcgccatcataactgtattgttggttggcatagc tttagccatcactgtcattgtctaccttgttgagaataaaccaaaagattctgatttcattaaaccagatgcaagtgtac aaaaaacaccatatggagcagtaaacagtggagtagaatggttgaggagacagcagcatgactacatgtggccacaagga cagagtgctgatgctgtgttagccctggggcttggcaaaatggacgaattcaacaaagacagctgtgaattcagactggc cataaaaagtgctgaatttgatattctatcagcaatgcttgcaaatggtaacctcaatgacgcaacatggggtagaggtg ttcttgccaaatacatagtagctctgcgcacggcatgtgttgatgttgcaatgttccataataacaacaacctgcttact atgctggaaacccaatacaacacctacaagaattactatgacggtgatagacgtgccttgtcttggtacgcgctggctag gtgtaccgctggagaggcagtggggagtgatattataaccagacttactgctaccccagggacttatagcatgggagtag aggaggcagccatggtggccattgcattgtcttgtatggattatatgaacatgacaatgtacggaacagaaataatggcc gcccatgactacatcatagcacaacaacgctctgacggaacatttggtaacgagtttgagactgccctagcacttcaggc tttgaaaaactcaaacgtcacaaacctgagaatgattcaagacaaagccttggaatatctttccacccttattcaagata cctataatgggcagtacaagaatctagcagcggcaagtcacattatgacagctctagcaggaaaatctttcgcagatgcc aaaatggattgccctgatatgatgacgacaacgcccgctccaggacaggccatacaaatcactatcagagttcgtggtgg agtaattaatagctccgtcagtcaggattacttgataaccattcgtgggggaaacagtctataccaggcattacaaacac tacaaatacaacagtcctcttttatgtttactgctgtgaatacagctagaggaaatgtgattcagagtgtgatggaactt aatctgaacccaaacagtctgcagtactggaaaattatggagggcagcaatgatgttactagtatgggtgttgactatat taccccaatggccagccaggtgtacactctagaagcagcttcttcctaa |
|
Protein
| Protein ID | pfu_aug2.0_887.1_24495.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_887.1_24495.t1 MADTKKSQSTKRLELCAIITVLLVGIALAITVIVYLVENKPKDSDFIKPDASVQKTPYGAVNSGVEWLRRQQHDYMWPQG QSADAVLALGLGKMDEFNKDSCEFRLAIKSAEFDILSAMLANGNLNDATWGRGVLAKYIVALRTACVDVAMFHNNNNLLT MLETQYNTYKNYYDGDRRALSWYALARCTAGEAVGSDIITRLTATPGTYSMGVEEAAMVAIALSCMDYMNMTMYGTEIMA AHDYIIAQQRSDGTFGNEFETALALQALKNSNVTNLRMIQDKALEYLSTLIQDTYNGQYKNLAAASHIMTALAGKSFADA KMDCPDMMTTTPAPGQAIQITIRVRGGVINSSVSQDYLITIRGGNSLYQALQTLQIQQSSFMFTAVNTARGNVIQSVMEL NLNPNSLQYWKIMEGSNDVTSMGVDYITPMASQVYTLEAASS |
|