Gene
| Gene Model ID | pfu_aug2.0_887.1_24498 |
|---|---|
| Locus | scaffold887.1 : 212375 ... 220859 : + |
| To GenomeBrowser | scaffold887.1:212375..220859 |
| Genes list of scaffold | scaffold887.1 |
| Synonym | pfu_aug1.0_39148.1_55704 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_887.1_24498.t1 | 1 | 1 | Cobalamin_bind | 95 | 299 | 4.0e-27 | 94.6 | 1.7e-30 | 6.2e-27 | 94.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_887.1_24498.t1 | gi|395544291|ref|XP_003774045.1| | 5.0e-22 | |
| pfu_aug2.0_887.1_24498.t1 | gi|594698907|ref|XP_007196574.1| | PREDICTED: gastric intrinsic factor [Balaenoptera acutorostrata scammoni] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_887.1_24498.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_887.1_24498.t1 atggttccggattgctacggatgcgctacgggttactacgactctcctacggatagctacgactccactacggtggtagg tttggcaaccgaagatggtgtacagtatcttctgaacaggagggtaaatggcgctggatggggatctcgacagaatgcag aggccgtaatggctctacgtttggcggatccagagcgtttttctgttggaaaatcaccaatcaattttgactatattcaa ggagtcaacgatatgttcattgaactaatatcagagctgaatcggccagattttgagaatgacacgttatgggctcacgg taaactcgcacagtacatggttggactgacatcagcatgtcaagacacccaatcattctatggctttgatgtagctagta ttgtcagacagcagttcaatacctttaaaagtttcttccaaaatcagaaatttgccctgtcttgggttgtacttgctctc tgcaatgccaatctgacagaagaaacggccgcaatggacattctaatcgcaaatcctggtgtttatacgttcggaatcga cgaggcctctatgaccgtgatggctttgtcatgcgtagacaatacgtcatattcagcagcacagagagcggctgaggatt tcatattaaatggtattaagccagacggatcgttcggtaatgaatacactacgggtcttgctatccaggcgttaacaagg tattccggagcaagaaacgatatcgatggtatgatccaaaaagctcaagactggttagcccgaaacgtcatcggtaaatt tgccaatgttgctatggcaaatcaagtcttgccagctttagcgagaagatcgtatgttgacatcaaagatctgaaatgtc atacaaaaccaaatacagcaccaacaccttcggcatcaggacaaagtatccaagttcgaattactgtaaaggataatctg atcagcgatactccatttgaaaggagctggttggcgaacggaaatgaaggagactccatgtttgttgttatgcaaaagtt ggagcaacaagaaccgtcttttaatttcaccagtataacattttctttcggggaatctattagaagtattgttggaattg cgaccgattcaggtcagagacaatattggcagttcctcagatatccagataccgtcatgcctacgg |
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Protein
| Protein ID | pfu_aug2.0_887.1_24498.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_887.1_24498.t1 MVPDCYGCATGYYDSPTDSYDSTTVVGLATEDGVQYLLNRRVNGAGWGSRQNAEAVMALRLADPERFSVGKSPINFDYIQ GVNDMFIELISELNRPDFENDTLWAHGKLAQYMVGLTSACQDTQSFYGFDVASIVRQQFNTFKSFFQNQKFALSWVVLAL CNANLTEETAAMDILIANPGVYTFGIDEASMTVMALSCVDNTSYSAAQRAAEDFILNGIKPDGSFGNEYTTGLAIQALTR YSGARNDIDGMIQKAQDWLARNVIGKFANVAMANQVLPALARRSYVDIKDLKCHTKPNTAPTPSASGQSIQVRITVKDNL ISDTPFERSWLANGNEGDSMFVVMQKLEQQEPSFNFTSITFSFGESIRSIVGIATDSGQRQYWQFLRYPDTVMPT |
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