Gene
| Gene Model ID | pfu_aug2.0_89.1_30176 |
|---|---|
| Locus | scaffold89.1 : 176654 ... 190305 : - |
| To GenomeBrowser | scaffold89.1:176654..190305 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug1.0_14515.1_61370 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_89.1_30176.t1 | 1 | 1 | FGGY_N | 31 | 235 | 8.8e-37 | 126.7 | 3.0e-39 | 2.3e-35 | 122.1 |
| pfu_aug2.0_89.1_30176.t1 | 2 | 1 | FGGY_C | 239 | 308 | 9.9e-26 | 90.5 | 2.5e-07 | 0.0018 | 17.9 |
| pfu_aug2.0_89.1_30176.t1 | 2 | 2 | FGGY_C | 310 | 399 | 9.9e-26 | 90.5 | 9.8e-24 | 7.3e-20 | 71.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_89.1_30176.t1 | gi|260796141|ref|XP_002593063.1| | hypothetical protein BRAFLDRAFT_278567 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_89.1_30176.t1 | gi|149018865|gb|EDL77506.1| | similar to RIKEN cDNA C330018K18 gene (predicted) [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_89.1_30176.t1 | gi|632933881|ref|XP_007891630.1| | PREDICTED: putative glycerol kinase 5 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_89.1_30176.t1 | gi|148689001|gb|EDL20948.1| | RIKEN cDNA C330018K18, isoform CRA_a [Mus musculus] | 0.0 |
| pfu_aug2.0_89.1_30176.t1 | gi|632933879|ref|XP_007891556.1| | PREDICTED: putative glycerol kinase 5 isoform X1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_89.1_30176.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30176.t1 atggatgacaagcatcgctccaagtttataaatagagttttaaagatggattcccctctgccccctccagaggatacaaa gaaaataccatacgttgtagcgttggacgtgggtacaacaagtataagaagtcatgtatataattctcagggcagaatta agggaactgactgtaagaaggtcaacctgatacatccacatcctggttgggtagaaatggatccctcggaactactcggc caagtcaaagactgtatcaaaaactctatcacagctgccggactgagtccatgtgatataacttgtctgggattaacagt tcagcgtaataccttcattacatgggacaggacaactggagaaccctttcataattttatcacatggcaagatttaagag caagagaaacggtgaaaaactggaacagctctatgagaatgaaggttttaaatggtggatcttcggtgcttcatttattt acccgtcaaaaaagatttctttctgccagcgtactcaagtttatgtctccgcaggtctcaatgagattattatgggcact tgaaaacattcaagagctgagagagcgagcagccgtagaagaggttatgtttggttgtatagagacgtggttgttatata acttaacaaaggagaaagtttttgccactgattattcatgtgctagtggtacgggcatgtttgatccattccaggttaaa tgtacaatgggcacaggaactttccttgatctcaacacaggcaaatctccacatgcctctatagctggtctgtttccttt gattggctggaaaataaaagatgacttaacgtatctggcagagggtattataagtgacacaggctctattattgaatttg ctaaatcattaggttttattgatgatgtctcagaaagtgcccgtttagctgaaagtgttagtgggctaaaacctggtata agtaaggctcatattgtccgagccattctggaatccatcgcataccggtttaagatattatacgagacattactcacaga atcaaaaataccgttgaataatataagggctgatgggggagtgtgcaataatgacttcttaatgcagctaatggctgatt tcacagaccagatgatagacagggctgcacaaccaggggagatgactagcttaggggcagccttccttgccggacttgag aaaggaatttggaaaagtaaagaagaacttcaaaacctacgacagacagaaaaagtttttacaaaccaaggttcatggtc aaagtacaaaaaccgttttgtacattgggagcgtgcagtcagtaggagtagagagtggtactgtgaatga |
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Protein
| Protein ID | pfu_aug2.0_89.1_30176.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30176.t1 MDDKHRSKFINRVLKMDSPLPPPEDTKKIPYVVALDVGTTSIRSHVYNSQGRIKGTDCKKVNLIHPHPGWVEMDPSELLG QVKDCIKNSITAAGLSPCDITCLGLTVQRNTFITWDRTTGEPFHNFITWQDLRARETVKNWNSSMRMKVLNGGSSVLHLF TRQKRFLSASVLKFMSPQVSMRLLWALENIQELRERAAVEEVMFGCIETWLLYNLTKEKVFATDYSCASGTGMFDPFQVK CTMGTGTFLDLNTGKSPHASIAGLFPLIGWKIKDDLTYLAEGIISDTGSIIEFAKSLGFIDDVSESARLAESVSGLKPGI SKAHIVRAILESIAYRFKILYETLLTESKIPLNNIRADGGVCNNDFLMQLMADFTDQMIDRAAQPGEMTSLGAAFLAGLE KGIWKSKEELQNLRQTEKVFTNQGSWSKYKNRFVHWERAVSRSREWYCE |
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