Gene
| Gene Model ID | pfu_aug2.0_89.1_30177 |
|---|---|
| Locus | scaffold89.1 : 192562 ... 221345 : - |
| To GenomeBrowser | scaffold89.1:192562..221345 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_89.1_30177.t1 | 1 | 1 | Aminotran_1_2 | 40 | 269 | 0.0 | 189.2 | 0.0 | 0.0 | 188.9 |
| pfu_aug2.0_89.1_30177.t1 | 1 | 1 | FGGY_N | 320 | 365 | 3.0e-08 | 33.3 | 6.1e-12 | 4.5e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_89.1_30177.t1 | gi|68655616|emb|CAD42721.2| | aspartate aminotransferase [Crassostrea gigas] | 0.0 |
| pfu_aug2.0_89.1_30177.t1 | gi|676450290|ref|XP_009052331.1| | hypothetical protein LOTGIDRAFT_231665 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_89.1_30177.t1 | gi|524886817|ref|XP_005100000.1| | PREDICTED: aspartate aminotransferase, cytoplasmic-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_89.1_30177.t1 | gi|260817890|ref|XP_002603818.1| | hypothetical protein BRAFLDRAFT_124686 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_89.1_30177.t1 | gi|585720796|ref|XP_002732064.2| | PREDICTED: aspartate aminotransferase, cytoplasmic-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_89.1_30177.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30177.t1 atgcaacaacaagcgtgcagtcaagatgacaagtcttccttttttggggacattgaaatggctcccccaattgaagtatt caatctgacaaggcaatacaatgaagatccacattctaagaaatacaatttaggagttggagcctacaggaccaatgatg ggaagccgtgggttctgccagtggtccgtacagtggaagctcaaatggcaacagacgaaactctaaaccacgagtactta ccagtggctggaatgccggactttcgtaaagaagccataaagttactccttggagaaaactgtagcgctattgtagaaaa cagggtagaaggtatacaagccattgggggtacaggagccatacgagtttgtgccaacttctgcaaaaaaattctcaact ttgataacatgtacacgtcgaatccaacatggggaaatcatatgggtatttttaaagcctgtggattctcaaatgtaaag cagtacagatactggaatgcagagactagatcaatagattttgagggaatgatagaagatttaggagcagcaccagacaa gacagtggttattttacatggttgttgtcataatccaacaggcgtcaatcccaataaagatcaatggagacaaatcattg accttgtcattgagaagaaatttatggtgctattggatgaagcttatcaaggttttgcgacaggcgatttagacgcagat ggatggacagctagatatttagtagaaagaggacttgaattttttgtttcacagtcattttcaaagaactttggattgta caacgaatcaggaaaatgtatttgtaaatgggttaagtcaacattaagaaaggatcttgatgactttccaggggtgcatc caagccagaggaaagtaaagagagttttaaagatggattcccctccgccccctccagaggatacaaagaaaatactatac gttgtagcattggacgtgggtacaacaagtataagaagtcatgtatataattctcagggcagaattaagggaactgactg taagaaggtcaacctgatacatccacatcctggttgggtagaaatggatccctcagnaaaactattgttatttaaagtat taggggtataa |
|
Protein
| Protein ID | pfu_aug2.0_89.1_30177.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30177.t1 MQQQACSQDDKSSFFGDIEMAPPIEVFNLTRQYNEDPHSKKYNLGVGAYRTNDGKPWVLPVVRTVEAQMATDETLNHEYL PVAGMPDFRKEAIKLLLGENCSAIVENRVEGIQAIGGTGAIRVCANFCKKILNFDNMYTSNPTWGNHMGIFKACGFSNVK QYRYWNAETRSIDFEGMIEDLGAAPDKTVVILHGCCHNPTGVNPNKDQWRQIIDLVIEKKFMVLLDEAYQGFATGDLDAD GWTARYLVERGLEFFVSQSFSKNFGLYNESGKCICKWVKSTLRKDLDDFPGVHPSQRKVKRVLKMDSPPPPPEDTKKILY VVALDVGTTSIRSHVYNSQGRIKGTDCKKVNLIHPHPGWVEMDPSXKLLLFKVLGV |
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