Gene
| Gene Model ID | pfu_aug2.0_89.1_30178 |
|---|---|
| Locus | scaffold89.1 : 234686 ... 276801 : + |
| To GenomeBrowser | scaffold89.1:234686..276801 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug1.0_26826.1_33579 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_89.1_30178.t1 | 6 | 1 | Laminin_EGF | 41 | 55 | 6.4e-19 | 67.6 | 3.5 | 8800.0 | -3.3 |
| pfu_aug2.0_89.1_30178.t1 | 5 | 1 | TIG | 72 | 113 | 1.2e-11 | 44.3 | 1.3 | 3100.0 | -1.8 |
| pfu_aug2.0_89.1_30178.t1 | 5 | 2 | TIG | 149 | 172 | 1.2e-11 | 44.3 | 4.1 | 10000.0 | -3.4 |
| pfu_aug2.0_89.1_30178.t1 | 1 | 1 | F5_F8_type_C | 263 | 385 | 7.7e-06 | 25.7 | 7.5e-09 | 1.9e-05 | 24.5 |
| pfu_aug2.0_89.1_30178.t1 | 6 | 2 | Laminin_EGF | 392 | 436 | 6.4e-19 | 67.6 | 0.00034 | 0.84 | 9.6 |
| pfu_aug2.0_89.1_30178.t1 | 6 | 3 | Laminin_EGF | 444 | 494 | 6.4e-19 | 67.6 | 5.3e-09 | 1.3e-05 | 25.0 |
| pfu_aug2.0_89.1_30178.t1 | 6 | 4 | Laminin_EGF | 497 | 541 | 6.4e-19 | 67.6 | 5.0e-09 | 1.2e-05 | 25.0 |
| pfu_aug2.0_89.1_30178.t1 | 6 | 5 | Laminin_EGF | 544 | 595 | 6.4e-19 | 67.6 | 1.5e-10 | 3.7e-07 | 29.9 |
| pfu_aug2.0_89.1_30178.t1 | 6 | 6 | Laminin_EGF | 598 | 624 | 6.4e-19 | 67.6 | 0.00045 | 1.1 | 9.2 |
| pfu_aug2.0_89.1_30178.t1 | 5 | 3 | TIG | 644 | 712 | 1.2e-11 | 44.3 | 1.6e-10 | 4.0e-07 | 29.9 |
| pfu_aug2.0_89.1_30178.t1 | 5 | 4 | TIG | 736 | 815 | 1.2e-11 | 44.3 | 3.9e-05 | 0.098 | 12.6 |
| pfu_aug2.0_89.1_30178.t1 | 5 | 5 | TIG | 853 | 909 | 1.2e-11 | 44.3 | 4.6e-05 | 0.11 | 12.4 |
| pfu_aug2.0_89.1_30178.t1 | 1 | 1 | Pkinase_Tyr | 1110 | 1320 | 0.0 | 166.2 | 0.0 | 0.0 | 165.5 |
| pfu_aug2.0_89.1_30178.t1 | 1 | 1 | Pkinase | 1117 | 1317 | 2.5e-21 | 75.9 | 1.9e-24 | 4.6e-21 | 75.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_89.1_30178.t1 | gi|524865557|ref|XP_005089607.1| | PREDICTED: uncharacterized protein LOC101856621 [Aplysia californica] | 0.0 |
| pfu_aug2.0_89.1_30178.t1 | gi|676450120|ref|XP_009052275.1| | hypothetical protein LOTGIDRAFT_56170, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_89.1_30178.t1 | gi|512820179|ref|XP_004879286.1| | 9.99967e-42 | |
| pfu_aug2.0_89.1_30178.t1 | gi|513007772|ref|XP_004865320.1| | PREDICTED: hepatocyte growth factor receptor isoform X1 [Heterocephalus glaber] | 9.99967e-42 |
| pfu_aug2.0_89.1_30178.t1 | gi|513007774|ref|XP_004865321.1| | PREDICTED: hepatocyte growth factor receptor isoform X2 [Heterocephalus glaber] | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug2.0_89.1_30178.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30178.t1 atggagatatctgtgaaagttttatattccgtctcgttgacgtgtactctcatagccctgagtgagcagacttacattga accgtctacaacatacactgatattcagttccaacaacagataactgcaacatcacgctgtaccagtagtacaaacggct gtagttctagtatctgtgctaattcaatatcatcaacaccatcatacaccactgtaactgctctcagtgcatgctctgtc agcaagaatagcttgagtattaatgtccccagcgaggtagcatcttcaaatgttgtttatgtcaatcagacatcaaatga ctgttcacgccagaccagagtaactgtatcctcagggacaggttatgccctcagcttctggatctatctggataatgttg tggacatctcgtctggatctacggtacagttatttgatataaacagtattaacatcaccattggtcactcaaagcagctg ataattaatggtgtttacaatcctaatagtatgtcacttcaaagagatagatggtatcacatagtggtgagaaagacaac acaaacgtttgtgaacgatgatagagaaaaattcaccagtattataaaaattgattactggtcatgtactcattcaggct atacctccaatgttggcaatccaagttgccgttgtccaaggttttatgccgatttagtgccatatgatgccgagggatta tactgccaggaacctcaagattcaagtcctaacaaagctttaaggcttagacaagactcccatttgccggtatttgccat agacaagaatgattctaccagctggcgatcacagaatttggcttccaatactcaaatggaatctctgactttaacattca cacagacatatatgattgatgaagtaaaagttaagagcactggagcaaaacctaatatgataaaaatagaacttatcaga gaaaacagcagatctgaagagtatgtggaagccggcactcgacttgtgaatgattacttcactctggatctacgtggcaa tgtaaccctcggtacaacttcaaaccgatcaaccgtggagagcatggtagcaaagagcataaagatcacattctccggaa gagcagacggtcagacgtattacgaaataccggaaatacaaattagaggaagatgttactgcagtggcgtagctacaagc tgcacacgtgattccactacacatacctacacatgtaacggatgtacacttgacagtacaggatcaagatgtgagaactg tgtaacagggaaatacatatcagaagaagattttggttgtcgaacaagttgtagttgtttttcagcaggcacggcaggtc ttccaaatgtttgtgaagtggacgggggtcagtgtaattgtaagaagaatgtagaactacagcagtgtaacatttgtaag ttcctaacgtacaacctgacaagctctaacccagacggatgtcagaactgtagctgtgacagatacggaagttctagctg tgacgaaaatactggagtctgtagctgcaaaaataatgtacagcccggtaattgtgcatcatgtattccaaactattttg gaagaaaccgaccaggaggctgtgtaccttgtggctgtaatgcaccaggcacggaacgtacaaagacggaaacatgcgaa gagttcacaggaatctgtgcatgtaaacagaatgttcaaggtggcaaatgtaccgaatgcaaaaacgagttctataatct gaacatagacaatactgcaggatgtgacgcctgcttgtgtagtaaaagaggcagtcgtgataacgtatgcgacaaaacct caggacagtgcacatgtacccacaatttgagccagtacacaagtttatgtaccaatggtgcttgtagacagtgtgatccg aagtcaaatagcgatttagatcctgcttttggaccaagtgccggtagcaccaaagttagggtatcaggaattttctttgg aaaccaaacaacagatgtggacatcagaatcggacagacctacctgacagtaacttacataaatgacacagttttagaat ttttgacagcaccaaatctaagtggtaatcaagaggttaaaattcagttcgttaacctacactttgggaatgatacacgg ccacctgcgggacttggaccatatactttccgttatttaccaaaccctacagtaacagctgccaacagtgctaaaacctt caagagtggtggttgtacagtgagcattaagggtacagctcttaacagtgtggcttatccaaaactgatagtgtataatg aacagcagacacaagagcttcaacgcagggattgccgaaggagtagtgacggcagtgagttgttttgtgattctcctagc atgtcctctaccggcacatatagatacggtttatacttggacggtttttctatgtaccgtaatttgtccggaatgtttgc taataatagtatcaagattatagaggacccaacagtcaaccaagcacaaggagacaaagagtttaaacctgtcttcggca gtactttctctatcaggggtgaccagttagatgctgcgtgttctaagagtgattacagagtggattgtgggtcagaggtc acatgtagtattgtgactgtatcaagtacagaggtgatctgtaaacctgatattagcttcccaggaccaggggtcactgt caaactaaagttaatgataggtgataaaactcacccagcccaggagatagagttcatgaccttttggagcacaacagagt tcatcggaatagcgatcggagcggctgcttttgtcgtaatagtgattatcatcatcgttttgtgttgttgctgccgtagt agacgggctaataaaaatatagatggtcatcgtgcgtcgtcaaggagagatgtaaaactggatagaataactgacaatcg tccacgagctatagtccaacccgaagtccagccgcccaaaccctgccccacgggacatcagtattacaacatatctcagt tatatcccaaacataactccccagaaaaggaaaactgggagaactttatacataggctgaatgagtctgtacgtaaacag ctggaatttagtaaaaccaacatggctgacatagaaccaggcaggatatgtacaaacaaaggagagcacataagaatcat tgatggaagttttaaagcaggaaccagtaactacctagctggaagaccggccaaaatcaagacattagtgagagaatatg atacatttgaatctggtctactcccgcagtgggtaagcagtgggttacaggaatgcctgaaattccgagactgtgtcaat gagaacttcctaccaatgaaaggagtcgctacagacgaaaagcgcttatatattctttacccctcatatcaccgaatctt caaagattacttgaatgataaagctatatcgaacacagtccgagagttaatggagtttgccttatacgctgccgatggcc tcaagtttcttcatgatgaaggcatagtacacaaggacctggcaaccaggaattgcataattacggagagcaagatagtt cagataactgatgcatcgttttcctgggatttgtatccaaatgaatacatgtatgacgagagaagggaacgttatttacc tgtacgatggatggcattagagagtctcaaagctggtttctacgacaaaaactctgatatttggacattcggagttgtaa tgtgggagattatgtttgagagtaacagtcttccgtatccagaagtcaccgataatacgaaaatcaaagatcacatagac ggtggctatagactcgggaaatcagaagaaacaccagacagtctgtataatctcatgttgcgatgctgggaagacgacag tgaaaaaagagtaaatatagatacattgatagacacgttacagagaatggtcgaccccgataactttggcgtaacgggtc tgtatatcaatgaagatgatatggagacgtatcaaaatacatccttcaccaatcaaggttttgtaaactga |
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Protein
| Protein ID | pfu_aug2.0_89.1_30178.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30178.t1 MEISVKVLYSVSLTCTLIALSEQTYIEPSTTYTDIQFQQQITATSRCTSSTNGCSSSICANSISSTPSYTTVTALSACSV SKNSLSINVPSEVASSNVVYVNQTSNDCSRQTRVTVSSGTGYALSFWIYLDNVVDISSGSTVQLFDINSINITIGHSKQL IINGVYNPNSMSLQRDRWYHIVVRKTTQTFVNDDREKFTSIIKIDYWSCTHSGYTSNVGNPSCRCPRFYADLVPYDAEGL YCQEPQDSSPNKALRLRQDSHLPVFAIDKNDSTSWRSQNLASNTQMESLTLTFTQTYMIDEVKVKSTGAKPNMIKIELIR ENSRSEEYVEAGTRLVNDYFTLDLRGNVTLGTTSNRSTVESMVAKSIKITFSGRADGQTYYEIPEIQIRGRCYCSGVATS CTRDSTTHTYTCNGCTLDSTGSRCENCVTGKYISEEDFGCRTSCSCFSAGTAGLPNVCEVDGGQCNCKKNVELQQCNICK FLTYNLTSSNPDGCQNCSCDRYGSSSCDENTGVCSCKNNVQPGNCASCIPNYFGRNRPGGCVPCGCNAPGTERTKTETCE EFTGICACKQNVQGGKCTECKNEFYNLNIDNTAGCDACLCSKRGSRDNVCDKTSGQCTCTHNLSQYTSLCTNGACRQCDP KSNSDLDPAFGPSAGSTKVRVSGIFFGNQTTDVDIRIGQTYLTVTYINDTVLEFLTAPNLSGNQEVKIQFVNLHFGNDTR PPAGLGPYTFRYLPNPTVTAANSAKTFKSGGCTVSIKGTALNSVAYPKLIVYNEQQTQELQRRDCRRSSDGSELFCDSPS MSSTGTYRYGLYLDGFSMYRNLSGMFANNSIKIIEDPTVNQAQGDKEFKPVFGSTFSIRGDQLDAACSKSDYRVDCGSEV TCSIVTVSSTEVICKPDISFPGPGVTVKLKLMIGDKTHPAQEIEFMTFWSTTEFIGIAIGAAAFVVIVIIIIVLCCCCRS RRANKNIDGHRASSRRDVKLDRITDNRPRAIVQPEVQPPKPCPTGHQYYNISQLYPKHNSPEKENWENFIHRLNESVRKQ LEFSKTNMADIEPGRICTNKGEHIRIIDGSFKAGTSNYLAGRPAKIKTLVREYDTFESGLLPQWVSSGLQECLKFRDCVN ENFLPMKGVATDEKRLYILYPSYHRIFKDYLNDKAISNTVRELMEFALYAADGLKFLHDEGIVHKDLATRNCIITESKIV QITDASFSWDLYPNEYMYDERRERYLPVRWMALESLKAGFYDKNSDIWTFGVVMWEIMFESNSLPYPEVTDNTKIKDHID GGYRLGKSEETPDSLYNLMLRCWEDDSEKRVNIDTLIDTLQRMVDPDNFGVTGLYINEDDMETYQNTSFTNQGFVN |
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