Gene
| Gene Model ID | pfu_aug2.0_89.1_30184 |
|---|---|
| Locus | scaffold89.1 : 351096 ... 378981 : + |
| To GenomeBrowser | scaffold89.1:351096..378981 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug1.0_10550.1_39068 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_89.1_30184.t1 | 3 | 1 | Cnd3 | 67 | 130 | 0.0 | 240.1 | 0.15 | 320.0 | 0.0 |
| pfu_aug2.0_89.1_30184.t1 | 4 | 1 | HEAT_2 | 128 | 202 | 1.5e-13 | 50.7 | 6.0e-08 | 0.00013 | 22.2 |
| pfu_aug2.0_89.1_30184.t1 | 6 | 1 | HEAT | 148 | 171 | 1.1e-09 | 37.5 | 0.00025 | 0.53 | 10.5 |
| pfu_aug2.0_89.1_30184.t1 | 4 | 2 | HEAT_2 | 188 | 267 | 1.5e-13 | 50.7 | 1.3e-06 | 0.0027 | 17.9 |
| pfu_aug2.0_89.1_30184.t1 | 6 | 2 | HEAT | 190 | 205 | 1.1e-09 | 37.5 | 0.046 | 97.0 | 3.4 |
| pfu_aug2.0_89.1_30184.t1 | 6 | 3 | HEAT | 212 | 235 | 1.1e-09 | 37.5 | 0.022 | 47.0 | 4.4 |
| pfu_aug2.0_89.1_30184.t1 | 6 | 4 | HEAT | 251 | 271 | 1.1e-09 | 37.5 | 0.13 | 270.0 | 2.0 |
| pfu_aug2.0_89.1_30184.t1 | 3 | 2 | Cnd3 | 369 | 425 | 0.0 | 240.1 | 0.21 | 450.0 | -0.4 |
| pfu_aug2.0_89.1_30184.t1 | 2 | 1 | UVR | 493 | 521 | 2.7e-12 | 45.7 | 5.0e-09 | 1.1e-05 | 24.7 |
| pfu_aug2.0_89.1_30184.t1 | 2 | 2 | UVR | 639 | 667 | 2.7e-12 | 45.7 | 5.0e-09 | 1.1e-05 | 24.7 |
| pfu_aug2.0_89.1_30184.t1 | 3 | 3 | Cnd3 | 697 | 1008 | 0.0 | 240.1 | 0.0 | 0.0 | 240.1 |
| pfu_aug2.0_89.1_30184.t1 | 4 | 3 | HEAT_2 | 717 | 749 | 1.5e-13 | 50.7 | 0.0019 | 3.9 | 7.8 |
| pfu_aug2.0_89.1_30184.t1 | 6 | 5 | HEAT | 726 | 749 | 1.1e-09 | 37.5 | 0.00092 | 1.9 | 8.7 |
| pfu_aug2.0_89.1_30184.t1 | 6 | 6 | HEAT | 839 | 862 | 1.1e-09 | 37.5 | 0.69 | 1500.0 | -0.2 |
| pfu_aug2.0_89.1_30184.t1 | 4 | 4 | HEAT_2 | 840 | 884 | 1.5e-13 | 50.7 | 0.18 | 390.0 | 1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_89.1_30184.t1 | gi|676456362|ref|XP_009054299.1| | hypothetical protein LOTGIDRAFT_117517 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_89.1_30184.t1 | gi|524867339|ref|XP_005090481.1| | PREDICTED: condensin complex subunit 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_89.1_30184.t1 | gi|585720816|ref|XP_006813156.1| | PREDICTED: condensin complex subunit 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_89.1_30184.t1 | gi|390351610|ref|XP_797662.3| | 0.0 | |
| pfu_aug2.0_89.1_30184.t1 | gi|704201615|ref|XP_010142363.1| | PREDICTED: condensin complex subunit 3 [Buceros rhinoceros silvestris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_89.1_30184.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30184.t1 atggcggacacagcaatgaaagaagtttttgtccaatgtcagaacagtatgcagtcacatggaaaactgctgaaaatgct gcataaaatatatgaaaagaaagagttcacagagttctggaaggactttcaacacctgatgaaatactctttgatcattt atcaacgagagcctgctgtggagagaaccattgatttcatctccaagtttgtaacgtacgtgactccgagcccaaacaac gaagggtcacaagatgactcgactctggatgaaatatcccagaacaaacttctacagttgatgtttgacttcctgctgca gtctcacaatgcctgtgaaaaagctgtacggttccgctgctgccagatgataaataagattctaggaacgttaggagagg atgcacagattgacgatgatctatatgacaggatctatgagagtatgcttgaaagattacgtgacaaacagcccatagtc aggatgcatgctgtcatggcactagctcgactccaagacccaagggatgaaaactgtcctgttataaaagcatacttatt tctggtgagttctgaccctaactacgaggtaaggagagtagtactgagtaacatagccccctccaccaagaccctccctg ctatcatacagaggacgagggacgtcaaggacagcgttaggaagatggcgtacaccgtactgggagaaaaagtccatatt aaagctctgtcgattgccaacagggtacggctcttacaggacggtctaactgatagatcagaaatggtcaagtcagcatg ctcaaccaaactgttacagacgtggttacgtacgtttggaggtaacgtactggacctactggggagtcttgacgtagaga actccacggagacttgtgaactagctctggaaacactgtttaagggagcatcgttatcagagatggtggaaagatttgac ctactggatgacaagatcttgattccattagaaaagttgaacagtgagagttccatgtattggcagacattatgtaagta catccataacttgggacacgagagtgatgagtacctggacaaagtactgccgaactgtgtggaattctgtcattacatac acagctttgtagagacattgaaggacctggacgacattgatgctcagttagaaaaggagtttgttatacagcagttactg accatgaccaaatacatggagctagctgaccaagcatccaggcgtgccgtagaaaaacttcttcatgatatgttgatagc cgatcatgtcggtcacagcctggtcagtcacatagtgcctcggctgtgtgagatcaaggacaatagtgacagcatggtgg tcaccctggccgagacggtgtccgagatacgagaacctatcaccacggtggaaaggggacctactcaggaggagaaacga caaaatgatatcaaaattgccagtatccgggtcaaactgaaccagcataaggaagaactagatgaggcagtgaagaacca ggattttgagaaagctgccgagattaaggcagtcatcagcgagtgtgagacagagagaaatgcactacttgaagtaggag aacctcacgtagaggaagtcagaactgagaagccgcttcctatcaaatcaaaatcagtcaacaattgccataaaataagg cgtgccgtagaaaaacttcttcatgatatgttgatagccgatcatgtcggtcacagcctggtcagtcacatagtgcctcg gctgtgtgagatcaaggacaatagtgacagcatggtggtcactctggccgagacggtgtccgagatacgagaacctatca ccacggtggaaaggggacctactcaggaggagaaacgacaaaatgatatcaaaattgctagtatccgggtcaaactgaac cagcataaggaagaacttgatgaggcagtgaagaaccaggattttgagaaagctgccgagattaaggcagtcatcagcga gtgtgagacagagagaaatgcactacttgaagtaggagaacctcacgtagaggaagtcagaactgagaagacggatgtta gtaccatactgaaatgtcaggccatcgtagctgagatgttagaagtactaccactgaagtctctcaatccaaccctacag atgttggtggaatcactgatattaccaggaattcagaatgaggattccagagtgaggaagctagctgtacaggccttggg cttgtgttgtgtactcagtaaggatctggtgctacaatatctacctttattcatgcaggcctcccaaatagatgccgaaa ttgtacgcaccacatcactacgtgttatatttgacatgttacacatgcacggattagaagccatccaacgtaataaagac ggagaagaaattgatgccaatacgtccggggaaggttttgatataagtcgtcgaagctccgtctcagaacgccaggaaga tgataggaatgacacggcatccaaactgatggtcttcttatgtggcttccttgatggagagagctcagaattaaggacag tggcagcagaaggattggccaaactgctcctgtcaggaagagtggtatcttccaagatcctgtctcaccttatattatta tggtataacccaaccacagaggatgactcacatctcaggcattgtctcggaactttcttcccaatctttgcttttgctgg aagaagtaaccaagaagtcgtagaggatgctttccttcccactcttaagactctactgaatgctccaacatcaagtccac tagcagaggttaatgtagagaatgttgcagagctcttggtacagctaagtaatgccagactacttatggagaatcagtct aatccagaggctgtcaaggataaccctctacatgacaacctggctgtgaaggtgtgcaatgaaatactgtccaatccaga ttccttcaaccttaaactatgggttaaaatcctgaaacagatcgaactgagtgaaaataacgatgtggtgttcaaagaac tggctgtactggcagaccagctcattgaggtggttaaggaaaagaaatgtcagaaaactctagagaagttccgagactct gtgaaagagaaagtacctgagacacctacggaagaaaatcaaaatcagaatgctatggaggtagaacagccagagccggt acctgaagaggctccccaaggggacactactcaacaagaagagccctcggaggcagatcgcacagcggagagatcggctt tcaatgatacagctctacaactagagggatccctcttcttacaggaggcaaagacacttagaagagctcagagtaaaata agcacttcctgcactccaccacgtgccactatgggaccacctgataaaggattgattcaaagccctgtagccgttctctt ctctacaaagtcaactgatcggcaagctctggtaaagtcccggacaaaatggcaagatcaagtactggctgaactggtag aggagggagaaggtggtgcaccggagacgaacgatggagaaaaatcttctgacacggcagagataagtaactccccgcag aaagatgagagcggaaagaaagattctacaagctctgaacaatcaccgtctgaaaaaggcaaagaatcaccagagaaact taacaccatagaggaggaatcccaggtcaaaactcccaaacgcaagaaaagattagatagtgacccaacatcggagaaaa ctaaatctccttcaaaaattcccagactcattagaaaggggacagaaaaatcaacaccttccaaaaatgagtctccagca aaggagagtccaaaagccaaaagaattactaaagcttcagataaaggaactgcggcagaaaaaccagagccaaagaaagc ttcaagcaaaaatgataaggcaggtgaagagaaagaaaaaattaaaggtaaaggtcctgcaaataagaaaagttctagct catctcagagtgaggaagaggaggtatctataaggaggagggttaaatctgctaccaggagtggacgtaaatcaggggat ctcagcaccactatgtcaaggtctaaactgagtactagtaccgtggcatcacctggtaaaccaaacacaccacaaaggtc aacaagaggaaataaaacgtctgattcagattcaggcacgccagctcaatccaaaaggcagtcacaggtgtcggactcat caacaacaaagggtaagaggaaaggttcagactcacaaaaagactcacaaacaccagtacgcgagactcgaggaacatcg gcaacggataaaagaggaaaaattaccacaccaagacaaaagtcggctactgacacacctaaaacttcacaatctccaag gcagtctcaaggctcggaaaggtcatcatctcgtggcaagagaggagcatctgattcacagtcaccaaggaggggaactt catcttctgataatggatctccagtaaagaaagcgaaaaaggcaggtgctagcaaggataccaagagccctgtcaaggaa aaactacagaagaaagacggagcagacaaggagaatagaggaaaatcacaggattctcctgctaggcctactaggggaaa gagaacactgggctccccagtaatggatgcttcatccaacaagaaggaccggaaaacaattgatacatcacagggatcaa agaaagtatctggtgataagggggcttctgtcactactcctcaacgcacccgagggaaggaagtagcatcctcctcacag agtaccagaactccggtaacaaacaaaaacaaggcgtctgactcagacaataccgagtcacctgccatgaggtcaaggac aaggaataatacagaacgggaagttggaagctccacgagtaaaaacagccagaaagacagtcagaaaaagccgaccaggt ctgctgccaggaaggcttggggagatcaggaaagtgatttggacaacagtgtattctcaagtccatctgatcgtagagcg tcaacaagatctgtatcgaaaactgccgacgtaaaaaagacaaaaactacgtctgctggaaggctggcatctactacatc tactgggaggctggcatccactagaagcaccaagtctacaagaagttctactaagaaatga |
|
Protein
| Protein ID | pfu_aug2.0_89.1_30184.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30184.t1 MADTAMKEVFVQCQNSMQSHGKLLKMLHKIYEKKEFTEFWKDFQHLMKYSLIIYQREPAVERTIDFISKFVTYVTPSPNN EGSQDDSTLDEISQNKLLQLMFDFLLQSHNACEKAVRFRCCQMINKILGTLGEDAQIDDDLYDRIYESMLERLRDKQPIV RMHAVMALARLQDPRDENCPVIKAYLFLVSSDPNYEVRRVVLSNIAPSTKTLPAIIQRTRDVKDSVRKMAYTVLGEKVHI KALSIANRVRLLQDGLTDRSEMVKSACSTKLLQTWLRTFGGNVLDLLGSLDVENSTETCELALETLFKGASLSEMVERFD LLDDKILIPLEKLNSESSMYWQTLCKYIHNLGHESDEYLDKVLPNCVEFCHYIHSFVETLKDLDDIDAQLEKEFVIQQLL TMTKYMELADQASRRAVEKLLHDMLIADHVGHSLVSHIVPRLCEIKDNSDSMVVTLAETVSEIREPITTVERGPTQEEKR QNDIKIASIRVKLNQHKEELDEAVKNQDFEKAAEIKAVISECETERNALLEVGEPHVEEVRTEKPLPIKSKSVNNCHKIR RAVEKLLHDMLIADHVGHSLVSHIVPRLCEIKDNSDSMVVTLAETVSEIREPITTVERGPTQEEKRQNDIKIASIRVKLN QHKEELDEAVKNQDFEKAAEIKAVISECETERNALLEVGEPHVEEVRTEKTDVSTILKCQAIVAEMLEVLPLKSLNPTLQ MLVESLILPGIQNEDSRVRKLAVQALGLCCVLSKDLVLQYLPLFMQASQIDAEIVRTTSLRVIFDMLHMHGLEAIQRNKD GEEIDANTSGEGFDISRRSSVSERQEDDRNDTASKLMVFLCGFLDGESSELRTVAAEGLAKLLLSGRVVSSKILSHLILL WYNPTTEDDSHLRHCLGTFFPIFAFAGRSNQEVVEDAFLPTLKTLLNAPTSSPLAEVNVENVAELLVQLSNARLLMENQS NPEAVKDNPLHDNLAVKVCNEILSNPDSFNLKLWVKILKQIELSENNDVVFKELAVLADQLIEVVKEKKCQKTLEKFRDS VKEKVPETPTEENQNQNAMEVEQPEPVPEEAPQGDTTQQEEPSEADRTAERSAFNDTALQLEGSLFLQEAKTLRRAQSKI STSCTPPRATMGPPDKGLIQSPVAVLFSTKSTDRQALVKSRTKWQDQVLAELVEEGEGGAPETNDGEKSSDTAEISNSPQ KDESGKKDSTSSEQSPSEKGKESPEKLNTIEEESQVKTPKRKKRLDSDPTSEKTKSPSKIPRLIRKGTEKSTPSKNESPA KESPKAKRITKASDKGTAAEKPEPKKASSKNDKAGEEKEKIKGKGPANKKSSSSSQSEEEEVSIRRRVKSATRSGRKSGD LSTTMSRSKLSTSTVASPGKPNTPQRSTRGNKTSDSDSGTPAQSKRQSQVSDSSTTKGKRKGSDSQKDSQTPVRETRGTS ATDKRGKITTPRQKSATDTPKTSQSPRQSQGSERSSSRGKRGASDSQSPRRGTSSSDNGSPVKKAKKAGASKDTKSPVKE KLQKKDGADKENRGKSQDSPARPTRGKRTLGSPVMDASSNKKDRKTIDTSQGSKKVSGDKGASVTTPQRTRGKEVASSSQ STRTPVTNKNKASDSDNTESPAMRSRTRNNTEREVGSSTSKNSQKDSQKKPTRSAARKAWGDQESDLDNSVFSSPSDRRA STRSVSKTADVKKTKTTSAGRLASTTSTGRLASTRSTKSTRSSTKK |
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