Gene
| Gene Model ID | pfu_aug2.0_89.1_30188 |
|---|---|
| Locus | scaffold89.1 : 471017 ... 484195 : - |
| To GenomeBrowser | scaffold89.1:471017..484195 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug1.0_3378.1_16103 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_89.1_30188.t1 | 1 | 1 | Neur_chan_LBD | 66 | 252 | 2.0e-11 | 43.4 | 7.5e-15 | 3.7e-11 | 42.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_89.1_30188.t1 | gi|676450209|ref|XP_009052304.1| | hypothetical protein LOTGIDRAFT_231643 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_89.1_30188.t1 | gi|676450200|ref|XP_009052301.1| | hypothetical protein LOTGIDRAFT_231641 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_89.1_30188.t1 | gi|676450203|ref|XP_009052302.1| | hypothetical protein LOTGIDRAFT_159539 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_89.1_30188.t1 | gi|676450196|ref|XP_009052300.1| | hypothetical protein LOTGIDRAFT_231640 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_89.1_30188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30188.t1 atggagtctccaacaaaatcctcagcaaaagaacaacccctgacaactatattcagaaggttgatagtcagcctggacaa gaataatcaggtcctagagaaagtatccaaacagttacagtatcaccatccagggagccaggctcagatcgtgttagaaa acaacagggaggaggaggacggcactggtcaaatcaacgaaaataaccaagtacatgtagaagtaaaactgacttttatg aaaatcaacgacatcgatactgtaacccaacagtttgaggcagaaatatttgtacaagccaaatgggaagaaccttattt tctgaagaatccttcaaaggaattcaaccccgatacaatgtggaccccaaaacttctcatcatgaacctagatggagagt tccagacgtccagaatgagttatactatagtgaaagacgtcgtgggatatgattatccgctggttctttgtctgtggaga ttcaagggattcttcaaggaaaacctagaactagaacatttccctatggatgttcaggatcttacaatatctgtgtccac agagctatcccaggaagaaattcttctcaccgaggacaggcagtctatgagctcagtcaatacaaaaacattcatggatg cgcaagagtggacaatattcaatcatgtggaaacgtacagggataagaccacagtggagtacgctagttctactgtacat cccattctccatgtgtcatgtcgtgtggccagaaagatcggctactttgtctggaatatcatattcatcgtgctgctgat cataagtttaacatttgccacattcactatagagcccagttcggcagatagacttgccgtaaccatcactctgttcctga cagccgtggccttcaaactggtagtgaaacagagtctacccaccatatcatacctaacatatcttgacctctatgtattg gctgccctgatgttccttggattacacgccacacagaatgcctgtcttaaacaccttgccgctaactttgataaggttga cgtagaaatctacgacaattattcaatgatttccctgaccgccacatttgtactattccatgccatatttggtacctaca tattcctgacagctaccaggagacggagactcatgtttgagaaggacaaaatatacaagataaggaaagctgaggtggaa aagtatatcacaggaactcccatgttaacagacatatctgtagaaactccaaaacccaaaggttctctggaaacccttcc acttgcctga |
|
Protein
| Protein ID | pfu_aug2.0_89.1_30188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30188.t1 MESPTKSSAKEQPLTTIFRRLIVSLDKNNQVLEKVSKQLQYHHPGSQAQIVLENNREEEDGTGQINENNQVHVEVKLTFM KINDIDTVTQQFEAEIFVQAKWEEPYFLKNPSKEFNPDTMWTPKLLIMNLDGEFQTSRMSYTIVKDVVGYDYPLVLCLWR FKGFFKENLELEHFPMDVQDLTISVSTELSQEEILLTEDRQSMSSVNTKTFMDAQEWTIFNHVETYRDKTTVEYASSTVH PILHVSCRVARKIGYFVWNIIFIVLLIISLTFATFTIEPSSADRLAVTITLFLTAVAFKLVVKQSLPTISYLTYLDLYVL AALMFLGLHATQNACLKHLAANFDKVDVEIYDNYSMISLTATFVLFHAIFGTYIFLTATRRRRLMFEKDKIYKIRKAEVE KYITGTPMLTDISVETPKPKGSLETLPLA |
|