Gene
| Gene Model ID | pfu_aug2.0_89.1_30189 |
|---|---|
| Locus | scaffold89.1 : 484316 ... 492136 : + |
| To GenomeBrowser | scaffold89.1:484316..492136 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug1.0_14364.1_03487 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_89.1_30189.t1 | 2 | 1 | NDK | 93 | 225 | 0.0 | 253.0 | 1.4013e-45 | 1.10002e-41 | 141.7 |
| pfu_aug2.0_89.1_30189.t1 | 2 | 2 | NDK | 239 | 372 | 0.0 | 253.0 | 7.6e-36 | 1.1e-31 | 109.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_89.1_30189.t1 | gi|657575597|ref|XP_008291543.1| | PREDICTED: nucleoside diphosphate kinase 7 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_89.1_30189.t1 | gi|676444491|ref|XP_009050446.1| | hypothetical protein LOTGIDRAFT_187020 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_89.1_30189.t1 | gi|597749546|ref|XP_007236704.1| | PREDICTED: nucleoside diphosphate kinase 7 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_89.1_30189.t1 | gi|556969315|ref|XP_005993467.1| | PREDICTED: nucleoside diphosphate kinase 7 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_89.1_30189.t1 | gi|573903161|ref|XP_006639304.1| | PREDICTED: nucleoside diphosphate kinase 7-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_89.1_30189.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30189.t1 atggaatcagaaggagatagatattgcttcatagcagaatggtacgatccccatgcagcttttattaggagataccagtt catgtactactcaaaagatggaacatgtgaaatgttcgatatcaagaaccacagaatgtttctcaaaaagaccaaattgg acaacgtaaaagttgaagatttatacataggaaatacagtgaacatattgtcaagacagatgaactttgtggactatgga gatgaatttacaaaaaacagactaacacacaaaacagaaagaacattaggaatgataaagccagatgccgtacccaagat gggtcaaatccttgaccttatttactcaaaaggatttatgatcacaagactcaaaatgtgtcaactcaatcgcaatgaag ctttccagttttaccaggaacatcaaggaaaaccattccttgatgctcttctgaactttgtaacgagaggtccagtgata gcatttgagatcatgggtgagtctgtgatacagaagtggagggatttattagggcctaccgactccgcacaggctagaca agacgcccccaactctatcaggtcaagatttggaaaagataagacagagaatgcctgtcatggttcagatagtactgcct cagctataagggagctggaattcttctttcccagcagtggaccctcacgtcaaaacaccgccaaattcacagactgcaca tgttgtgttatcaaaccacacgccgtcaaggcaggtcaagcaggaaaaatcatacaggccattgcagaagctggttttga gatttcaatgttagaaatgttccacatggagaaagctaatgccgaggagttctatgaagtatacaaatcggtggttcaag aatacggagccatggtttctgaattaacgtcagggccgtccatcgccatggaaatccgagcacagaatgcaccacaagct ttcagggagatggttggaccagccgatcctgagattgctcgtcacctgagaccgaggactttacgagccctttttggagc tgacaaagtaagaaactctgttcactgtacagatttaccagaagatggactgttagaggatgaatattttttcaaaattc ttggatgctga |
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Protein
| Protein ID | pfu_aug2.0_89.1_30189.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30189.t1 MESEGDRYCFIAEWYDPHAAFIRRYQFMYYSKDGTCEMFDIKNHRMFLKKTKLDNVKVEDLYIGNTVNILSRQMNFVDYG DEFTKNRLTHKTERTLGMIKPDAVPKMGQILDLIYSKGFMITRLKMCQLNRNEAFQFYQEHQGKPFLDALLNFVTRGPVI AFEIMGESVIQKWRDLLGPTDSAQARQDAPNSIRSRFGKDKTENACHGSDSTASAIRELEFFFPSSGPSRQNTAKFTDCT CCVIKPHAVKAGQAGKIIQAIAEAGFEISMLEMFHMEKANAEEFYEVYKSVVQEYGAMVSELTSGPSIAMEIRAQNAPQA FREMVGPADPEIARHLRPRTLRALFGADKVRNSVHCTDLPEDGLLEDEYFFKILGC |
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