Gene
| Gene Model ID | pfu_aug2.0_89.1_30191 |
|---|---|
| Locus | scaffold89.1 : 495327 ... 515265 : - |
| To GenomeBrowser | scaffold89.1:495327..515265 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug1.0_14364.1_03489 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_89.1_30191.t1 | 1 | 1 | 5_nucleotid | 76 | 456 | 0.0 | 386.5 | 0.0 | 0.0 | 386.2 |
| pfu_aug2.0_89.1_30191.t1 | 1 | 1 | Ribosomal_L2 | 474 | 551 | 2.1e-18 | 66.0 | 7.8e-22 | 5.8e-18 | 64.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_89.1_30191.t1 | gi|524903334|ref|XP_005107869.1| | PREDICTED: 5'-nucleotidase domain-containing protein 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_89.1_30191.t1 | gi|557004168|ref|XP_006004038.1| | PREDICTED: 5'-nucleotidase domain-containing protein 2-like [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_89.1_30191.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30191.t1 atgttcccgggcccggggttttctcaaagttcgaaaatgaaagttttcagaccagcgaagattttatattttgcagtgca taacctctcaaaaaggaacatttctggacaaatacgtctatattcttcttatgtaaacagtaaaagagactggtgggaaa tttatcacgagagaaagaaaaaagtttacgacaaccctaactacacagagacgagatctgacgcggtatttgccaataat gagatttccctcggtgatattgatatctatggttttgattacgattatactttagcactgtacaagccagcacttcattc cctgatatacaaactaggaggtcatgcgcttgttgagaaccttaagtatcctaaggagattttatcactagactacaaag aggactttgctgttagaggatgtcattacgatgtcagaaagggacttctaatgaaactggattctttccataatatccag cttggcactgtgtacaaaggtacgagacagctcagtgatactgcagtgaagtcattatataacggtacacatgtggcact ggatgatatgaactctttctatggcacaggacctttgatgtaccaactagtagatctctttgcgcctccagagatgattt tattgacaaatataactgatttctttttagacaacaatattccatacgatcctgagtatgttttccatgatgtcaggagt tccgtacaaggtgttcacaactctggggcactacattcagctatcatgcaagatttagacacatacgtggacaaagggaa tgaaataaaggcgttgttagagtcacttgtccagaacggcaagaaactcttcctaatcacgaacagtggattcccttttg tcgatgcggggatgaagtttatggtaggacaagattggagggatctattccatgtcattattaccaaagccaggaaacca aagtttttcaatgaatcctcaagaccatttagaatgttagacccgactactcagaatgagtcatatgacagagtttatcg tcttgttcaaggcaaagtctaccaacagggtaacttctacatgctgaggcagatgacaggatggtacagctttaatgtat tgtattttggagaccatgtttacagtgacttggctgatccctctctaaagagtggatggagaaccggtgctattattcca gaattagagaaagaaaccttgattatgaacagtgcagattatcatactgccgttaattggttggggcaacttgagaatct catagaaatatctcagatggataaaagtccagagaccagttctattcgaaaacagtggttagacgagagacatgaactca ggatctcaaaggtcaagttcatcatgggccgagttattaggtcccagagaaagggtccagggagtgtgtttaaggcacac actaaacataggaagggtaaagcttcccttagacctatagactttgctgagagacatggatatattaaaggtgtcgtcaa ggacataattcacgatccaggtcgtggcgctcccctcgccagggtagtgttccgtgatccatacaagtacagacacaaga tggaaacatttgttgctacagagggaatgtacacaggacagtttgtttactgtggcaaaaaagcattagtaaacaaaatg atacataagagagttcttgaaaatttcaatggaatgtcggacatttttagaggccaaataatgagacataaactactctc cagatag |
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Protein
| Protein ID | pfu_aug2.0_89.1_30191.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30191.t1 MFPGPGFSQSSKMKVFRPAKILYFAVHNLSKRNISGQIRLYSSYVNSKRDWWEIYHERKKKVYDNPNYTETRSDAVFANN EISLGDIDIYGFDYDYTLALYKPALHSLIYKLGGHALVENLKYPKEILSLDYKEDFAVRGCHYDVRKGLLMKLDSFHNIQ LGTVYKGTRQLSDTAVKSLYNGTHVALDDMNSFYGTGPLMYQLVDLFAPPEMILLTNITDFFLDNNIPYDPEYVFHDVRS SVQGVHNSGALHSAIMQDLDTYVDKGNEIKALLESLVQNGKKLFLITNSGFPFVDAGMKFMVGQDWRDLFHVIITKARKP KFFNESSRPFRMLDPTTQNESYDRVYRLVQGKVYQQGNFYMLRQMTGWYSFNVLYFGDHVYSDLADPSLKSGWRTGAIIP ELEKETLIMNSADYHTAVNWLGQLENLIEISQMDKSPETSSIRKQWLDERHELRISKVKFIMGRVIRSQRKGPGSVFKAH TKHRKGKASLRPIDFAERHGYIKGVVKDIIHDPGRGAPLARVVFRDPYKYRHKMETFVATEGMYTGQFVYCGKKALVNKM IHKRVLENFNGMSDIFRGQIMRHKLLSR |
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