Gene
| Gene Model ID | pfu_aug2.0_89.1_30192 |
|---|---|
| Locus | scaffold89.1 : 516446 ... 519500 : + |
| To GenomeBrowser | scaffold89.1:516446..519500 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug1.0_59294.1_56262 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_89.1_30192.t1 | 2 | 1 | Fibrinogen_C | 197 | 272 | 0.0 | 173.5 | 1.4e-33 | 6.8e-30 | 104.3 |
| pfu_aug2.0_89.1_30192.t1 | 2 | 2 | Fibrinogen_C | 283 | 376 | 0.0 | 173.5 | 9.8e-24 | 4.9e-20 | 72.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_89.1_30192.t1 | gi|586562329|ref|XP_006914422.1| | PREDICTED: angiopoietin-related protein 7 [Pteropus alecto] | 0.0 |
| pfu_aug2.0_89.1_30192.t1 | gi|759129866|ref|XP_011361863.1| | PREDICTED: angiopoietin-related protein 7 [Pteropus vampyrus] | 0.0 |
| pfu_aug2.0_89.1_30192.t1 | gi|149024625|gb|EDL81122.1| | rCG30616 [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_89.1_30192.t1 | gi|297666467|ref|XP_002811546.1| | PREDICTED: angiopoietin-related protein 7 [Pongo abelii] | 0.0 |
| pfu_aug2.0_89.1_30192.t1 | gi|667308278|ref|XP_008583663.1| | PREDICTED: angiopoietin-related protein 7 [Galeopterus variegatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_89.1_30192.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30192.t1 atggaatattcttggctgatatttggagtatttgctctcttagccaaaaggaataatgggcaagtttatatatttcagac aattgaagatcacaaccaaagactaactgctgttgaatctacaatagctaatatgaccatatgctgtaacgcggttcgaa atgaaaatgaatggttaaaactggttactgcaaatctgacgtcgatgttaaaaagtctaacaagagaagtagagttacta aaatcgcaatcaaaatcaggagcgtcatcgacgaccgtgacgcaacaaagcagtgcgccgtcaaagcaaacaagagttac gacaatgcttatgacgccaacctcaacattactaccaacgcctacgtcttcaagccaacctacaatgacgccaacgtcga tagtgcaaccaaagtcgacgttttcagtttcaacccaacctaaatcgacgccaacatcaacagttctaccaaagacaacg cccatttctagtttaccaaaatcgacgccaacgtcggtaattcagccaaattccaatcaatcaaaggcaacaccaatgac accaacaagaacctcgacatcaagcacaacacatcagacaccgataatggcatactgtgacatggagcatgacggtggtg gctggaccgtgatccaaagacgacgtgatggtagcgtgagttttgaccgtgactgggcgtcgtaccgtgacggattcggt aacacatccggggagttctggctgggtaacgatcatatccacgatctgacccgcagcgggaataccagactgcgtattga ggtgatggactggctacgggtgactggtgactcctttaactaccccaactcgtacctactacgtcacaaccagatggctt tcagtaccaaggacagagatcatgataacaacttcaacaactgtgctagagtcctcaacggcggatggtggtttaactca tgttatagctccaaccttaatggtcagttttcgaagaccggaccctatggtacccacactatgggggaaattgccggaga accaacactagagggcactggtgtggagtggtatccatggaaacataaacaatactctttgttacaaagtgaaatgaaaa tcagaccagaagtattcccatga |
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Protein
| Protein ID | pfu_aug2.0_89.1_30192.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_89.1_30192.t1 MEYSWLIFGVFALLAKRNNGQVYIFQTIEDHNQRLTAVESTIANMTICCNAVRNENEWLKLVTANLTSMLKSLTREVELL KSQSKSGASSTTVTQQSSAPSKQTRVTTMLMTPTSTLLPTPTSSSQPTMTPTSIVQPKSTFSVSTQPKSTPTSTVLPKTT PISSLPKSTPTSVIQPNSNQSKATPMTPTRTSTSSTTHQTPIMAYCDMEHDGGGWTVIQRRRDGSVSFDRDWASYRDGFG NTSGEFWLGNDHIHDLTRSGNTRLRIEVMDWLRVTGDSFNYPNSYLLRHNQMAFSTKDRDHDNNFNNCARVLNGGWWFNS CYSSNLNGQFSKTGPYGTHTMGEIAGEPTLEGTGVEWYPWKHKQYSLLQSEMKIRPEVFP |
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