Gene
| Gene Model ID | pfu_aug2.0_890.1_01225 |
|---|---|
| Locus | scaffold890.1 : 78075 ... 91335 : - |
| To GenomeBrowser | scaffold890.1:78075..91335 |
| Genes list of scaffold | scaffold890.1 |
| Synonym | pfu_aug1.0_6948.1_24110 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_890.1_01225.t1 | 2 | 1 | BTB | 23 | 116 | 1.2e-16 | 60.6 | 1.8e-19 | 2.9e-16 | 59.4 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 1 | zf-H2C2_2 | 319 | 330 | 8.8e-25 | 85.7 | 1.7 | 2700.0 | -1.1 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 1 | zf-C2H2_4 | 325 | 346 | 1.9e-24 | 84.1 | 0.00018 | 0.3 | 11.5 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 1 | zf-C2H2 | 325 | 346 | 1.3e-35 | 119.5 | 0.0011 | 1.9 | 9.0 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 2 | zf-H2C2_2 | 338 | 346 | 8.8e-25 | 85.7 | 4.1 | 6800.0 | -2.3 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 3 | zf-H2C2_2 | 394 | 406 | 8.8e-25 | 85.7 | 0.0036 | 6.0 | 7.3 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 2 | zf-C2H2_4 | 395 | 418 | 1.9e-24 | 84.1 | 3.5e-05 | 0.057 | 13.7 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 2 | zf-C2H2 | 395 | 418 | 1.3e-35 | 119.5 | 4.0e-05 | 0.066 | 13.5 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 4 | zf-H2C2_2 | 411 | 417 | 8.8e-25 | 85.7 | 9.0 | 15000.0 | -4.3 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 3 | zf-C2H2_4 | 471 | 493 | 1.9e-24 | 84.1 | 0.5 | 820.0 | 0.7 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 3 | zf-C2H2 | 471 | 493 | 1.3e-35 | 119.5 | 0.23 | 380.0 | 1.7 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 5 | zf-H2C2_2 | 508 | 522 | 8.8e-25 | 85.7 | 6.1 | 10000.0 | -2.9 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 4 | zf-C2H2_4 | 514 | 536 | 1.9e-24 | 84.1 | 0.075 | 120.0 | 3.3 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 4 | zf-C2H2 | 514 | 536 | 1.3e-35 | 119.5 | 0.014 | 23.0 | 5.5 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 6 | zf-H2C2_2 | 528 | 553 | 8.8e-25 | 85.7 | 0.00046 | 0.76 | 10.1 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 5 | zf-C2H2_4 | 543 | 563 | 1.9e-24 | 84.1 | 0.00065 | 1.1 | 9.7 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 5 | zf-C2H2 | 543 | 566 | 1.3e-35 | 119.5 | 2.7e-06 | 0.0045 | 17.2 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 7 | zf-H2C2_2 | 557 | 605 | 8.8e-25 | 85.7 | 0.038 | 63.0 | 4.1 |
| pfu_aug2.0_890.1_01225.t1 | 2 | 2 | BTB | 561 | 580 | 1.2e-16 | 60.6 | 1.5 | 2400.0 | -1.6 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 6 | zf-C2H2_4 | 596 | 614 | 1.9e-24 | 84.1 | 0.06 | 99.0 | 3.6 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 6 | zf-C2H2 | 596 | 616 | 1.3e-35 | 119.5 | 0.011 | 18.0 | 5.9 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 8 | zf-H2C2_2 | 617 | 639 | 8.8e-25 | 85.7 | 1.1 | 1900.0 | -0.6 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 7 | zf-C2H2_4 | 629 | 652 | 1.9e-24 | 84.1 | 8.6e-05 | 0.14 | 12.5 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 7 | zf-C2H2 | 629 | 651 | 1.3e-35 | 119.5 | 1.1e-05 | 0.017 | 15.4 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 9 | zf-H2C2_2 | 643 | 675 | 8.8e-25 | 85.7 | 0.025 | 42.0 | 4.6 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 8 | zf-C2H2_4 | 662 | 686 | 1.9e-24 | 84.1 | 9.2e-06 | 0.015 | 15.5 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 8 | zf-C2H2 | 662 | 686 | 1.3e-35 | 119.5 | 6.2e-07 | 0.001 | 19.2 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 10 | zf-H2C2_2 | 678 | 699 | 8.8e-25 | 85.7 | 1.1e-08 | 1.9e-05 | 24.7 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 9 | zf-C2H2_4 | 692 | 715 | 1.9e-24 | 84.1 | 0.00057 | 0.93 | 9.9 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 9 | zf-C2H2 | 692 | 715 | 1.3e-35 | 119.5 | 0.00048 | 0.79 | 10.1 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 11 | zf-H2C2_2 | 707 | 731 | 8.8e-25 | 85.7 | 6.1e-06 | 0.01 | 16.1 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 10 | zf-C2H2_4 | 722 | 744 | 1.9e-24 | 84.1 | 4.4e-06 | 0.0073 | 16.5 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 10 | zf-C2H2 | 723 | 744 | 1.3e-35 | 119.5 | 2.4e-06 | 0.004 | 17.4 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 12 | zf-H2C2_2 | 736 | 761 | 8.8e-25 | 85.7 | 1.1e-08 | 1.8e-05 | 24.7 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 11 | zf-C2H2_4 | 750 | 773 | 1.9e-24 | 84.1 | 0.00022 | 0.36 | 11.2 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 11 | zf-C2H2 | 750 | 773 | 1.3e-35 | 119.5 | 0.00012 | 0.2 | 12.0 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 13 | zf-H2C2_2 | 765 | 793 | 8.8e-25 | 85.7 | 0.00025 | 0.41 | 11.0 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 12 | zf-C2H2_4 | 785 | 805 | 1.9e-24 | 84.1 | 0.006 | 9.9 | 6.7 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 12 | zf-C2H2 | 785 | 807 | 1.3e-35 | 119.5 | 0.0066 | 11.0 | 6.6 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 14 | zf-H2C2_2 | 800 | 822 | 8.8e-25 | 85.7 | 1.9e-05 | 0.032 | 14.5 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 13 | zf-C2H2_4 | 813 | 832 | 1.9e-24 | 84.1 | 0.0002 | 0.33 | 11.4 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 13 | zf-C2H2 | 813 | 836 | 1.3e-35 | 119.5 | 4.0e-07 | 0.00065 | 19.8 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 15 | zf-H2C2_2 | 828 | 852 | 8.8e-25 | 85.7 | 9.8e-05 | 0.16 | 12.3 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 14 | zf-C2H2_4 | 841 | 862 | 1.9e-24 | 84.1 | 0.0044 | 7.3 | 7.1 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 14 | zf-C2H2 | 841 | 864 | 1.3e-35 | 119.5 | 9.9e-05 | 0.16 | 12.3 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 16 | zf-H2C2_2 | 856 | 875 | 8.8e-25 | 85.7 | 0.0071 | 12.0 | 6.4 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 17 | zf-H2C2_2 | 912 | 921 | 8.8e-25 | 85.7 | 0.0069 | 11.0 | 6.4 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 15 | zf-C2H2_4 | 913 | 933 | 1.9e-24 | 84.1 | 0.006 | 9.9 | 6.7 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 15 | zf-C2H2 | 913 | 935 | 1.3e-35 | 119.5 | 0.0066 | 11.0 | 6.6 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 18 | zf-H2C2_2 | 928 | 950 | 8.8e-25 | 85.7 | 1.9e-05 | 0.032 | 14.5 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 16 | zf-C2H2_4 | 941 | 960 | 1.9e-24 | 84.1 | 0.0002 | 0.33 | 11.4 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 16 | zf-C2H2 | 941 | 964 | 1.3e-35 | 119.5 | 4.0e-07 | 0.00065 | 19.8 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 19 | zf-H2C2_2 | 956 | 980 | 8.8e-25 | 85.7 | 9.8e-05 | 0.16 | 12.3 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 17 | zf-C2H2_4 | 969 | 990 | 1.9e-24 | 84.1 | 0.0044 | 7.3 | 7.1 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 17 | zf-C2H2 | 969 | 992 | 1.3e-35 | 119.5 | 9.9e-05 | 0.16 | 12.3 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 20 | zf-H2C2_2 | 984 | 1011 | 8.8e-25 | 85.7 | 5.9e-06 | 0.0097 | 16.1 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 18 | zf-C2H2_4 | 1000 | 1023 | 1.9e-24 | 84.1 | 0.00013 | 0.22 | 11.9 |
| pfu_aug2.0_890.1_01225.t1 | 18 | 18 | zf-C2H2 | 1000 | 1023 | 1.3e-35 | 119.5 | 0.013 | 21.0 | 5.7 |
| pfu_aug2.0_890.1_01225.t1 | 21 | 21 | zf-H2C2_2 | 1015 | 1026 | 8.8e-25 | 85.7 | 0.13 | 210.0 | 2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_890.1_01225.t1 | gi|557332579|ref|XP_006039084.1| | PREDICTED: zinc finger protein 91-like [Alligator sinensis] | 9.99995e-41 |
| pfu_aug2.0_890.1_01225.t1 | gi|564228580|ref|XP_006258739.1| | PREDICTED: zinc finger protein 850-like, partial [Alligator mississippiensis] | 2.0e-39 |
| pfu_aug2.0_890.1_01225.t1 | gi|260822661|ref|XP_002606720.1| | hypothetical protein BRAFLDRAFT_82360 [Branchiostoma floridae] | 3.0e-39 |
| pfu_aug2.0_890.1_01225.t1 | gi|640809303|ref|XP_008061212.1| | PREDICTED: zinc finger protein 658-like [Tarsius syrichta] | 4.0e-39 |
| pfu_aug2.0_890.1_01225.t1 | gi|260794583|ref|XP_002592288.1| | hypothetical protein BRAFLDRAFT_71028 [Branchiostoma floridae] | 6.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_890.1_01225.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_890.1_01225.t1 atggatgttctgatgagtctgaaccatgacggcaagttgagtgactttctctacaaggcatacgggtcaaggttattctg tgaccttgatgtggtgacctctgaccagaccagttaccaagtccacagagttgtcttggcaacattctctaattactttc ataagaaactaaagcagaagaagagcacagacatgattcagatagacatagactcgtcagttttcaaagtcctgctagag ttcatgtatacaggacagctaagtgtcacagcaaatgaaagacattccctttacactgctacttgtatcctgggaattga atcagcacaggagttgattcagaatgcatatgtcacgagtgattggtcaactaactctaatttaaattcaaaattgacca ctgacacaaaaagtacagatcaagaatctctaattgatccattaattcaggaaatcattatggaaaccgatcagtcagat gtaaaaaatgagattcaagagagcttaacagagaaggttgtaaaaaagaagtcctccaaaagaattcaggaaaaaaggac aaagaagaaagccattccatcaacccccaaacctaaaccttcaccaaaacagaataagaaatcaaaaatatctaaaagag gcagaggaaaaaaaacaccaagtgctttgatagaggaaaaggatgagcagaatgagttttttaaagacgagggtactcaa ctggatgacaaggatcctgaatatatatcttatacaccagcagtaccaaaagtaaaagaagaaaaaacttgcaagtctga aacagaaaatcaattcaaaaatgtaaagcccaagtcaaataagaaagaagcacgaaaaaacaaaaagaaagcaaagtgtg ttatcaagtcagaggaaggaatgttgttgagaaaaaggaagaaaaggacaacccaaaaaattctcataccaacaaagaag aaaatatctgactgtccaatttgcttaaagccaatgaaaacacctctttgtctgagacggcatatggtacaagaacatgt tatgtattcggtaaaaattccaaagtcacaacttcttctgaagtcgtctatccataaaaaccttgcaaggaagtttattg aatttgaagccaatgagaatatatctgtgagatctgcattggagaaagacgatatagagcctttcaaatgtaaaatatgt caacgtaaattcaagtattacagcatgatcaaaaggcatattggaaaaaagcatttacatatatcatacgctgtacaaag aaggaaaagctatcgaggattgtataggagtattgtggaatttctggatatgcggaaaaaggcttttggccccaaagctt cctctagaaaaggtggtagagggtcaaggatgaggaaggtgcctactacaaagtgctacatttgtggacagtccatagct gaaggtcgtggatactcgaaccacctgatgaagttacatggcatgtcagaggacgaagctagaggtgtgacaggctatcc taaattcccaaagagatgctcatgtcacgagtgtcaggtagaatttgataatctcaaactgttgaaagaacactgtaaaa tggtgcatggagtaacagattactcctatccatgctcacaatgtgacagtacatattctgcgctggctaatttgaagtca cacatgcgttggcagcatagtgtaagcttacagaagatttccgagtactttgaaacattgataccctgtgaggtagaggg ctgtgacttttcatgcggagtagagtacagatgtgatgtttgcggcttcaccttccatgtcatagcaatgttacataaac acaaattcttcaagcactatcacaaagagagtccgttagatcactttagatgtgaaacgtgccagagaagcttcagtaaa cgataccatctcagacaacatctgttcaggcaccatggtattaaagtgggagcattcaagacatacaagtgtacgtttga aggctgtggtaaggaatgtactacaagctctggtcttagatctcatatgagacgacataccaaggaaaagacattcaagt gtgaatactgcaatcagctactcaagaccgatacgacatacaggaagcacatcaacaagatgcatcttgggatacgcccc catctttgtcagatctgtggtcagacgtttggagaggagtcagaattaaagtcacatatcagaaatctacactccagtga aaaggaatttcagtgtgaccactgcccttatgctacatctaacaaatcaacattatacactcacttgtacatggtccaca aagttcaagcagagggtgacaacagggaaatttatgaatgcccgatttgtaacttcacaacaattttgggacatcgcttt agaactcacatgaatggtcataaaaacatcagagaatacaagtgtaatgtgtgtggaaaagaattcatctctagcagtac actgagagcacataaacaatgggcacattctgacaaaaaatactcctgccctcattgtccataccagaccaagactgtgc agaaacttaatgagcacattcgcatacaacatcaactgaaaggctacaagccctatagttgtccgnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatggtccacaaagttcaagcagaggg tgacaacagggaaatttatgaatgcccgatttgtaacttcacaacaattttgggacatcgctttagaactcacatgaatg gtcataaaaacatcagagaatacaagtgtaatgtgtgtggaaaagaattcatctctagcagtacactgagagcacataaa caatgggcacattctgacaaaaaatactcctgccctcattgtccataccagaccaagactgtgcagaaacttaatgagca cattcgcatacaacatcaactgaaaggctacaagccctatagttgtccgtattgtagttttacgtgtgctacaggtggga actgtagaaagcacatcaaacagaagcacaaaggtcaggaagtaaggtacattcgagacgatagtttactcggggcagct cgagtggcacggatgtcgggtaacacttcaactgtcaatgtagtcccgatacaaactgtggcatctgaagcaacccaaac atatcaggtgacagacaatttgcaagccactgctgagccatctgtaaacgagaataacagtgatagaataattcagcatg atgtgaatattcaaacgtacactacgatcacaaacgtgatggacgatgaagctgcctcagcctctgccaatctagagcaa acccaatctatgggtcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn ggcactaa |
|
Protein
| Protein ID | pfu_aug2.0_890.1_01225.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_890.1_01225.t1 MDVLMSLNHDGKLSDFLYKAYGSRLFCDLDVVTSDQTSYQVHRVVLATFSNYFHKKLKQKKSTDMIQIDIDSSVFKVLLE FMYTGQLSVTANERHSLYTATCILGIESAQELIQNAYVTSDWSTNSNLNSKLTTDTKSTDQESLIDPLIQEIIMETDQSD VKNEIQESLTEKVVKKKSSKRIQEKRTKKKAIPSTPKPKPSPKQNKKSKISKRGRGKKTPSALIEEKDEQNEFFKDEGTQ LDDKDPEYISYTPAVPKVKEEKTCKSETENQFKNVKPKSNKKEARKNKKKAKCVIKSEEGMLLRKRKKRTTQKILIPTKK KISDCPICLKPMKTPLCLRRHMVQEHVMYSVKIPKSQLLLKSSIHKNLARKFIEFEANENISVRSALEKDDIEPFKCKIC QRKFKYYSMIKRHIGKKHLHISYAVQRRKSYRGLYRSIVEFLDMRKKAFGPKASSRKGGRGSRMRKVPTTKCYICGQSIA EGRGYSNHLMKLHGMSEDEARGVTGYPKFPKRCSCHECQVEFDNLKLLKEHCKMVHGVTDYSYPCSQCDSTYSALANLKS HMRWQHSVSLQKISEYFETLIPCEVEGCDFSCGVEYRCDVCGFTFHVIAMLHKHKFFKHYHKESPLDHFRCETCQRSFSK RYHLRQHLFRHHGIKVGAFKTYKCTFEGCGKECTTSSGLRSHMRRHTKEKTFKCEYCNQLLKTDTTYRKHINKMHLGIRP HLCQICGQTFGEESELKSHIRNLHSSEKEFQCDHCPYATSNKSTLYTHLYMVHKVQAEGDNREIYECPICNFTTILGHRF RTHMNGHKNIREYKCNVCGKEFISSSTLRAHKQWAHSDKKYSCPHCPYQTKTVQKLNEHIRIQHQLKGYKPYSCPXXXXX XXXXXXXXXXXXXXXXXXMVHKVQAEGDNREIYECPICNFTTILGHRFRTHMNGHKNIREYKCNVCGKEFISSSTLRAHK QWAHSDKKYSCPHCPYQTKTVQKLNEHIRIQHQLKGYKPYSCPYCSFTCATGGNCRKHIKQKHKGQEVRYIRDDSLLGAA RVARMSGNTSTVNVVPIQTVASEATQTYQVTDNLQATAEPSVNENNSDRIIQHDVNIQTYTTITNVMDDEAASASANLEQ TQSMGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH |
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