Gene
| Gene Model ID | pfu_aug2.0_890.1_01226 |
|---|---|
| Locus | scaffold890.1 : 100263 ... 119585 : - |
| To GenomeBrowser | scaffold890.1:100263..119585 |
| Genes list of scaffold | scaffold890.1 |
| Synonym | pfu_aug1.0_13629.1_68658 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| translation initiation factor | GO:0003743 GO:0006413 GO:0031047 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_890.1_01226.t1 | 1 | 1 | DUF1785 | 166 | 218 | 2.5e-22 | 77.9 | 9.6e-26 | 4.7e-22 | 77.0 |
| pfu_aug2.0_890.1_01226.t1 | 1 | 1 | PAZ | 227 | 360 | 5.9e-37 | 125.9 | 2.1e-40 | 1.0e-36 | 125.2 |
| pfu_aug2.0_890.1_01226.t1 | 2 | 1 | Piwi | 469 | 708 | 0.0 | 379.3 | 0.0 | 0.0 | 262.9 |
| pfu_aug2.0_890.1_01226.t1 | 2 | 2 | Piwi | 744 | 822 | 0.0 | 379.3 | 6.6e-37 | 3.3e-33 | 114.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_890.1_01226.t1 | gi|676486510|ref|XP_009064000.1| | hypothetical protein LOTGIDRAFT_235802 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_890.1_01226.t1 | gi|524902720|ref|XP_005107588.1| | PREDICTED: protein argonaute-2-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_890.1_01226.t1 | gi|524902722|ref|XP_005107589.1| | PREDICTED: protein argonaute-2-like isoform X4 [Aplysia californica] | 0.0 |
| pfu_aug2.0_890.1_01226.t1 | gi|524902716|ref|XP_005107586.1| | PREDICTED: protein argonaute-2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_890.1_01226.t1 | gi|524902718|ref|XP_005107587.1| | PREDICTED: protein argonaute-2-like isoform X2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_890.1_01226.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_890.1_01226.t1 atgtttccaattgccccaggacaagctgtgccgtttgctcctttcccacctataccaagccctgaatgtctagaaggaaa gccaatagcactgagggcaaaccacttccaaatcaggatacctaaaggtgttatccatcattatgaagtgtttatcactc ccgaaaaatgccctcgtagggtcaatagggaaatcgtggaaaccatggtacaagcctacagtcagagaatattctcagga caaaaaccagtgtttgatggacgtagaaatttgtacagcagggatgcccttcctataggcaaagataaagttgagttaga ggtgactttaccgggggaaggcagggacagggtgtttacagtagccattaaatgggtggcacaggtcagtctgtacagcc tggaggaggccctagagggcagggcacgacggatacccttcgaggccattcaggccctggatgttatcatgagacatctc cctagtatgacatataccccagtaggtcgttcatttttctccccgccagagggatacgatcatccactaggcggggggag ggaggtttggtttggcttccatcagagtgttagaccgtcatcgtggaaaatgcttctcaacatagatgtatcagctacag cattttataaggcccagccagtcatagagtttatgtgtgaggtgttggaccttgctagtcttggagaacaaaggaggcca cttacagattcacagagagtgaaatttacaaaggagatcaggggtctgaaagtggagataactcactgtggatcaatgcg acggaagtacagagtttgtaacgtgactcgtaggccagctcaaactcagtcattccctctccagctagattctggtcaga ctgtagattgcacagtggctcggtatttccttgaacgatacaaaatgaagttacaatatcctcatctaccttgcttacag gtcggccaggaacataaacacacatatctaccgttagaggtctgtaatgttgtcggtggtcagagatgtataaagaagtt gactgacctccagacttctaccatgataagggcaacagccagaaatgctccagatagggaaaaggaaattaacaatctgc agaccaaggcccaagctttgcccaatcagggagtatgggacatgaggggtaagcagttctggcatggtatagagatccgt atctgggctatagcctgttttgctcctcagaggagttgtagggaggacgcactgaggaacttcactcagcagttacagaa gatatctaacgatgcaggcatgcccatgttaagtcagccagtcttctgtaaatacgcaaccggggccgatcaagtggaac caatgttccgttatctgaagaacacataccaaggtctacaactggtagtgattgtattacctgggagaacacctgtatat gctgaggtgaagcgagttggagacatcctttttggtttagcaactcagtgtgtacaatctaagaacgtgaacaaaactac gccgcaaacattatcaaatctgtgcttaaagatcaacgtcaaactaggaggcattaacaatatccttttacccagcatgc gaccagcagtgtttcgtcagcctgtgatattccttggagctgatgtgacacacccaccagcaggggacacaacaaaacct tctatagccgcagttgtaggaagtatggatgcccatcctagtcgttactcagctaccgtcagaattcagcaacatcggca agagatcattcaagagttatctaccatggttagagagctactcatctccttctacaaagttactcggtttaagccaacca gaattattatgtatagagatggggtcagtgaaggacagtttcagcaggtcctgtcatatgaattacgagcagttagagaa gcttgtatgaagttagagatgggttatcagccaggcattacgtacatcgtggtacagaaacgtcaccacactcgactatt ctgtgccgatagaaaagaccagtgtggtaagagtgggaacataccggctgggactacagtagatgtcggcatcacccacc ctacggagtttgatttctatctatgcagccatgctggaatacaggtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggcatcaccca ccctacagagtttgatttctatctatgcagccatgctggaatacagggtacaagtcgtccttcacattaccatgtcctct gggatgacaacagatttaacgctgacgacctccagaccttgacataccagctgtgtcatacgtacgtcagatgtacacgt agtgtctccataccagcgcccgcatactatgcacatctagtcgcattccgtgcacgctaccacctagttgagaaagatca cgacagtggagaaggaagtagacattctgatgaaatggagaggacaccaacagcgatggcaagggcaataactgtgcatc ctgacagtacaaaggtcatgtattttgcgtga |
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Protein
| Protein ID | pfu_aug2.0_890.1_01226.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_890.1_01226.t1 MFPIAPGQAVPFAPFPPIPSPECLEGKPIALRANHFQIRIPKGVIHHYEVFITPEKCPRRVNREIVETMVQAYSQRIFSG QKPVFDGRRNLYSRDALPIGKDKVELEVTLPGEGRDRVFTVAIKWVAQVSLYSLEEALEGRARRIPFEAIQALDVIMRHL PSMTYTPVGRSFFSPPEGYDHPLGGGREVWFGFHQSVRPSSWKMLLNIDVSATAFYKAQPVIEFMCEVLDLASLGEQRRP LTDSQRVKFTKEIRGLKVEITHCGSMRRKYRVCNVTRRPAQTQSFPLQLDSGQTVDCTVARYFLERYKMKLQYPHLPCLQ VGQEHKHTYLPLEVCNVVGGQRCIKKLTDLQTSTMIRATARNAPDREKEINNLQTKAQALPNQGVWDMRGKQFWHGIEIR IWAIACFAPQRSCREDALRNFTQQLQKISNDAGMPMLSQPVFCKYATGADQVEPMFRYLKNTYQGLQLVVIVLPGRTPVY AEVKRVGDILFGLATQCVQSKNVNKTTPQTLSNLCLKINVKLGGINNILLPSMRPAVFRQPVIFLGADVTHPPAGDTTKP SIAAVVGSMDAHPSRYSATVRIQQHRQEIIQELSTMVRELLISFYKVTRFKPTRIIMYRDGVSEGQFQQVLSYELRAVRE ACMKLEMGYQPGITYIVVQKRHHTRLFCADRKDQCGKSGNIPAGTTVDVGITHPTEFDFYLCSHAGIQVXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXGITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFNADDLQTLTYQLCHTYVRCTR SVSIPAPAYYAHLVAFRARYHLVEKDHDSGEGSRHSDEMERTPTAMARAITVHPDSTKVMYFA |
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