Gene
| Gene Model ID | pfu_aug2.0_890.1_01230 |
|---|---|
| Locus | scaffold890.1 : 212778 ... 220447 : - |
| To GenomeBrowser | scaffold890.1:212778..220447 |
| Genes list of scaffold | scaffold890.1 |
| Synonym | pfu_aug1.0_6610.1_60067 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein kinase pim-1 | GO:0004674 GO:0005524 GO:0005737 GO:0007346 GO:0007634 GO:0043066 GO:0046777 GO:0048593 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_890.1_01230.t1 | 2 | 1 | Pkinase | 11 | 34 | 0.0 | 215.1 | 0.00031 | 0.67 | 9.0 |
| pfu_aug2.0_890.1_01230.t1 | 2 | 1 | Pkinase_Tyr | 14 | 31 | 5.2e-27 | 94.5 | 0.0074 | 16.0 | 4.4 |
| pfu_aug2.0_890.1_01230.t1 | 2 | 2 | Pkinase | 76 | 325 | 0.0 | 215.1 | 0.0 | 0.0 | 204.2 |
| pfu_aug2.0_890.1_01230.t1 | 2 | 2 | Pkinase_Tyr | 79 | 321 | 5.2e-27 | 94.5 | 2.3e-28 | 4.8e-25 | 88.1 |
| pfu_aug2.0_890.1_01230.t1 | 1 | 1 | Kinase-like | 147 | 312 | 1.5e-10 | 40.4 | 1.1e-13 | 2.2e-10 | 39.9 |
| pfu_aug2.0_890.1_01230.t1 | 1 | 1 | Kdo | 152 | 223 | 8.5e-10 | 38.0 | 6.7e-13 | 1.4e-09 | 37.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_890.1_01230.t1 | gi|676495770|ref|XP_009066994.1| | hypothetical protein LOTGIDRAFT_204907 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_890.1_01230.t1 | gi|632947674|ref|XP_007889168.1| | PREDICTED: serine/threonine-protein kinase pim-3 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_890.1_01230.t1 | gi|617459165|ref|XP_007571378.1| | PREDICTED: serine/threonine-protein kinase pim-1 [Poecilia formosa] | 0.0 |
| pfu_aug2.0_890.1_01230.t1 | gi|734629739|ref|XP_010743177.1| | PREDICTED: serine/threonine-protein kinase pim-1-like [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_890.1_01230.t1 | gi|658856710|ref|XP_008411012.1| | PREDICTED: serine/threonine-protein kinase pim-1 [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_890.1_01230.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_890.1_01230.t1 caaaagacaaggagacttttaccaagtcgtacagtgttggtccagttttaggcagcgggggattcgggacagtttattca ggtgttcgcagaaaggacaacttaccgtgtgttatgttgggacgaaaaacgaacatgttttctcacaacgggaataatcc aaatgtctgtcagcaagagaaagagtgtaataaagcaaaagacaaggagacttttaccaagtcgtacagtgttggtccag ttttaggcagcgggggattcgggacagtttattcaggtgttcgcagaaaggacaacttaccggtcgctgtcaagttgatc gccagagagaaagttgtagaatggggaaatatcaatggttctcctgtaccactggaaatatgtttattaaaaaaagtttc aaactgtcaaggagttattaaaatgttagactggtttgaagtgaaggaaaatttcctaattgtgatggaaaaaccagagc cagttcaggatttatttgactatatcacagaaaaaggtgctttagatgaagaaaccagcaaaaacttcttcagacaaatt gtggaaacaatagtgaatattcatagacaaggtgtagttcacagggacattaaagacgaaaacatattgatagatctcaa atctggagaacttaaattaatcgactttggatctggtgcatttttaaaagacaccgtctatctcacttttgatggaacgc gtgtttatagtccccctgagtggattaagtaccacaggtatcatgggcgatcggcgacagtgtggtcacttggtattctg ttgtacgacttggtctgtggggatattccattcgaacaagatgaccaaatcatgaaggccgaagtgacgtttagaggacg tatttcaaatgaagtgaaagaccttattcgttcgtgcttatccatccgcccatcagacagaccctccttggaggacattc tgaatcaccagtggcttgccactcccaagttagctgttgacaaactctcaatccgtacaccgagttctcagaatatgagt tcgacgggctcagtggacgccgagtcaatgagcagccaggagtcgatatga |
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Protein
| Protein ID | pfu_aug2.0_890.1_01230.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_890.1_01230.t1 KDKETFTKSYSVGPVLGSGGFGTVYSGVRRKDNLPCVMLGRKTNMFSHNGNNPNVCQQEKECNKAKDKETFTKSYSVGPV LGSGGFGTVYSGVRRKDNLPVAVKLIAREKVVEWGNINGSPVPLEICLLKKVSNCQGVIKMLDWFEVKENFLIVMEKPEP VQDLFDYITEKGALDEETSKNFFRQIVETIVNIHRQGVVHRDIKDENILIDLKSGELKLIDFGSGAFLKDTVYLTFDGTR VYSPPEWIKYHRYHGRSATVWSLGILLYDLVCGDIPFEQDDQIMKAEVTFRGRISNEVKDLIRSCLSIRPSDRPSLEDIL NHQWLATPKLAVDKLSIRTPSSQNMSSTGSVDAESMSSQESI |
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