Gene
| Gene Model ID | pfu_aug2.0_892.1_07992 |
|---|---|
| Locus | scaffold892.1 : 205508 ... 216164 : + |
| To GenomeBrowser | scaffold892.1:205508..216164 |
| Genes list of scaffold | scaffold892.1 |
| Synonym | pfu_aug1.0_4761.1_37963 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_892.1_07992.t1 | 1 | 1 | Tctex-1 | 10 | 106 | 1.1e-27 | 95.8 | 8.0e-32 | 1.2e-27 | 95.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_892.1_07992.t1 | gi|676444314|ref|XP_009050388.1| | hypothetical protein LOTGIDRAFT_203677 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_892.1_07992.t1 | gi|291220942|ref|XP_002730479.1| | PREDICTED: tctex1 domain-containing protein 2-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_892.1_07992.t1 | gi|260807923|ref|XP_002598757.1| | hypothetical protein BRAFLDRAFT_212933 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_892.1_07992.t1 | gi|524887136|ref|XP_005100157.1| | PREDICTED: tctex1 domain-containing protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_892.1_07992.t1 | gi|198428125|ref|XP_002128994.1| | PREDICTED: tctex1 domain-containing protein 2-like [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_892.1_07992.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_892.1_07992.t1 atgtttagagtattccgtcccatcattgtgaaagaggcaatccataacatacttaatgaacatttgactggtaaaaacta cgatgccgaggagacgacggaatggtcacgacaaatagctgatgaaatcaaagtcaagctcaaagaattaggttatgaca gatataaattcatagtacaagttgtaataggagaacaaagaggagaaggggtcaagatgggctgtaggtgtttctgggac tcagatactgataattatgctcaggatatatttatgaatgattcaatattttgtgtagcggcagcgtttggttgttttta ctactga |
|
Protein
| Protein ID | pfu_aug2.0_892.1_07992.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_892.1_07992.t1 MFRVFRPIIVKEAIHNILNEHLTGKNYDAEETTEWSRQIADEIKVKLKELGYDRYKFIVQVVIGEQRGEGVKMGCRCFWD SDTDNYAQDIFMNDSIFCVAAAFGCFYY |
|