Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_893.1_11274
Locus scaffold893.1 : 32907 ... 62085 : -
To GenomeBrowser scaffold893.1:32907..62085
Genes list of scaffold scaffold893.1
Synonym pfu_aug1.0_18513.1_11138

Manual annotation
Annotation by Blast2GO
Annotation GO
uncharacterized protein loc100367428 GO:0007165

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_893.1_11274.t1 2 1 TIR 80 109 1.5e-34 118.4 1.9 5600.0 -3.4
pfu_aug2.0_893.1_11274.t1 2 2 TIR 284 419 1.5e-34 118.4 8.8e-38 2.6e-34 117.6
pfu_aug2.0_893.1_11274.t1 1 1 TIR_2 285 395 2.2e-17 63.0 1.5e-20 4.4e-17 62.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_893.1_11274.t1 gi|676482333|ref|XP_009062664.1| hypothetical protein LOTGIDRAFT_166958 [Lottia gigantea] 0.0
pfu_aug2.0_893.1_11274.t1 gi|676421696|ref|XP_009043837.1| hypothetical protein LOTGIDRAFT_152123 [Lottia gigantea] 0.0
pfu_aug2.0_893.1_11274.t1 gi|676477051|ref|XP_009060989.1| hypothetical protein LOTGIDRAFT_165708 [Lottia gigantea] 0.0
pfu_aug2.0_893.1_11274.t1 gi|291234956|ref|XP_002737415.1| PREDICTED: uncharacterized protein LOC100367428 [Saccoglossus kowalevskii] 4.2039e-45
pfu_aug2.0_893.1_11274.t1 gi|524885991|ref|XP_005099596.1| PREDICTED: uncharacterized protein LOC101856027 [Aplysia californica] 2.0e-40

Transcript
Transcript IDpfu_aug2.0_893.1_11274.t1
Definition-
>pfu_aug2.0_893.1_11274.t1
atgaagttgttcaagctcaatttggtggaagtccaagatggaactgactcggacttagacttaggtcgtagggctaaaga
gagtgttacaagagaaagtacagcgtacctcgtccgtcatccgattcgtgatatgttagcttcatattacaaccaagaaa
catgtcatgtaggctgtaaatgtgaggatgggtacgaagggaacagatgtacacaaagaagggaagatggcagagaggtc
cagaacgtgtcaagttctgatgtcgtcagaatgtctctgtcggtgtcatcgacgttctcatccacgataaaagatgacga
tgacagagggaacaagagtgacttcataacgactacacatagaccattagtgtctttatttgaaggcaaaactcccgaca
gggttctcatttcaaaagccagagaaaatgattcagtaaatcctttcattctgtcaagcctcagacgatcaggtattgac
atatttcatactttacgtcctggaagtggtacgataaagtctgaagaaacaacccagggcgttactgaacttaccaaagt
gttttactcgtcaacaacatctgctcacaaaatcgataacccagaaaatcagaaaccgaaggcatacaaaatcaggataa
aacaggaaccaaagcacactccattttctgatgctgcagaggagacgtggtactggtacgtggtgggtgtatgtatcaca
ttggcagtgttactcaccgcgctcatcttcatcttaccttactggctgtggaagaagcgatggctcttcgtcatgaagat
agtccattactttcagcagtacgaggaagatgatggtaaggagtatgacgccttcatctcctacaagtcctccaaagaag
accaagagttcgtgttacagcagcttcatccaaaacttgaggccgagatgggattcaaactatgtttacacttcagggac
ttcacacctggcgatgcgattgcaaacaacataattcaggccatagagaacagccgtcgtaccatcatgatattgtcacc
aaactatgtggatagtgaatggtgccgtatggagtatcagaaagcacaacacgagatgcttaaactaaaacacaagatca
ttccaatcatgttcaaggatatatctaaatgcagttcaatcgacaaaaacttgaaaacaatcctaaacaccgtcacatat
ctagagtggcccggcgaggaaaattccaaaaagatggagcgattctggaagcaactagagttgacgctaccaaagaagcg
tatgctggcaccggcaccttttcctgtggtagagtccaccctgccgtcatctaatctcaccgccatcattcccccgtcaa
gcccttgtagagattccattccaaatattacctcatatggttccccaattgctacagaaacttgcataccaaacaatgtt
caggataacaaagacacagtcattgctgacaacaaaacacatcgtataaagagactaatgaaagacgtcctgaaacttaa
aatcaacactcatacaaactcctttactagactccaccgggaggcgtctgtagaatcaggtgtggtcacaccctcaacag
ccacgccctctcccggtatgtgtttaactaaagacgaaactccccttttgtccaggaagaaaccttctcatagacgatgt
aaatctctgaactggtcagatcgtacagtgaaaatccctcgctccgacgaggtacaaatcaggtcgcttcgtgaaaagga
atcatgtagacttcgtattgacgtcataccaccttctccggatggtgaagacaacaaattgacaaatttgcccgatattt
gtcgaaccgatgagggaggctactataatattgtctgtgaagaagaaactgtcaaggaatacgaacgcgattcaagatcc
gttgaccatcacttggattgtaatacatgcgtaatcgacaatgattcaaatcgagggcaccctcctcctacaccaattct
tactcaccaaatattaggcctcatggaaacggacagtgcccgacgttgtacgagtgttcgaaataatccatcataccgaa
cacactcttgcaaaccaagtaatagtgagtatgaaaattacaatggggattgtgaaacttgtatattagctaaagccgat
ccatcgattgaccagaatctgaactcgtctgtatcagtgaaaggtaacttgaatcagaaaagaagtttccgaattcagtc
atttgtgaattcccctccgcccgaggaactgaattcgagaagtaaaaataaaatatcgaacattacgtgtaattctggag
aaaaaccatctaatattatttcaaatacaggacatccatgtaatggatgtgattacaacgaatctttacgaaaggagaca
gaaacatacgaagaggttctgccaccgggcgaatctttgccgatgactaaagccgatccatcgattgaccagaatctgaa
ctcgtctgtatcagtgaaaggtaacttgaatcagaaaagaagtttccgaattcagtcatttgtgaattcccctccgcccg
aggaactgaattcgagaagtaaaaataaaatatcgaacattacgtgtaattctggagaaaaaccatctaatattatttca
aatacaggacatccatgtaatggatgtgattacaacgaatctttacgaaaggagacagaaacatacgaagaggttctgcc
accgggcgaatctttgccgatgagtgagtcgcctgtattcaatatctatgagagcattgggcaacaagaaacaaatataa
atgagactatcccaacaccaccgaaaaggacgaaaaagctttcaaggaaaataacaagagataattga

Protein
Protein IDpfu_aug2.0_893.1_11274.t1
Definition-
>pfu_aug2.0_893.1_11274.t1
MKLFKLNLVEVQDGTDSDLDLGRRAKESVTRESTAYLVRHPIRDMLASYYNQETCHVGCKCEDGYEGNRCTQRREDGREV
QNVSSSDVVRMSLSVSSTFSSTIKDDDDRGNKSDFITTTHRPLVSLFEGKTPDRVLISKARENDSVNPFILSSLRRSGID
IFHTLRPGSGTIKSEETTQGVTELTKVFYSSTTSAHKIDNPENQKPKAYKIRIKQEPKHTPFSDAAEETWYWYVVGVCIT
LAVLLTALIFILPYWLWKKRWLFVMKIVHYFQQYEEDDGKEYDAFISYKSSKEDQEFVLQQLHPKLEAEMGFKLCLHFRD
FTPGDAIANNIIQAIENSRRTIMILSPNYVDSEWCRMEYQKAQHEMLKLKHKIIPIMFKDISKCSSIDKNLKTILNTVTY
LEWPGEENSKKMERFWKQLELTLPKKRMLAPAPFPVVESTLPSSNLTAIIPPSSPCRDSIPNITSYGSPIATETCIPNNV
QDNKDTVIADNKTHRIKRLMKDVLKLKINTHTNSFTRLHREASVESGVVTPSTATPSPGMCLTKDETPLLSRKKPSHRRC
KSLNWSDRTVKIPRSDEVQIRSLREKESCRLRIDVIPPSPDGEDNKLTNLPDICRTDEGGYYNIVCEEETVKEYERDSRS
VDHHLDCNTCVIDNDSNRGHPPPTPILTHQILGLMETDSARRCTSVRNNPSYRTHSCKPSNSEYENYNGDCETCILAKAD
PSIDQNLNSSVSVKGNLNQKRSFRIQSFVNSPPPEELNSRSKNKISNITCNSGEKPSNIISNTGHPCNGCDYNESLRKET
ETYEEVLPPGESLPMTKADPSIDQNLNSSVSVKGNLNQKRSFRIQSFVNSPPPEELNSRSKNKISNITCNSGEKPSNIIS
NTGHPCNGCDYNESLRKETETYEEVLPPGESLPMSESPVFNIYESIGQQETNINETIPTPPKRTKKLSRKITRDN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495