Gene
| Gene Model ID | pfu_aug2.0_895.1_17912 |
|---|---|
| Locus | scaffold895.1 : 94611 ... 120525 : - |
| To GenomeBrowser | scaffold895.1:94611..120525 |
| Genes list of scaffold | scaffold895.1 |
| Synonym | pfu_aug1.0_2932.1_44525 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glutamate receptor kainate 2 isoform x1 | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_895.1_17912.t2 | 1 | 1 | ANF_receptor | 14 | 422 | 0.0 | 168.0 | 0.0 | 0.0 | 167.2 |
| pfu_aug2.0_895.1_17912.t2 | 1 | 1 | SBP_bac_3 | 464 | 824 | 4.3e-23 | 81.7 | 2.4e-26 | 7.1e-23 | 81.0 |
| pfu_aug2.0_895.1_17912.t2 | 1 | 1 | Lig_chan-Glu_bd | 473 | 534 | 1.4e-07 | 31.3 | 1.4e-10 | 4.3e-07 | 29.8 |
| pfu_aug2.0_895.1_17912.t2 | 1 | 1 | Lig_chan | 589 | 861 | 0.0 | 179.3 | 0.0 | 0.0 | 178.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_895.1_17912.t2 | gi|325297076|ref|NP_001191543.1| | glutamate receptor subunit protein GluR7 precursor [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_895.1_17912.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_895.1_17912.t1 atggagaaaactggtttatttgaaccagaaaacgttggtgctaagataacgttcagatggacgatccagaagttaaacct tcagggtgataacgacattgtcatagtttcaaatccaatagacattgccaaagatgacagcttccaagtttcaaaacgag tatgtagtgacattgaggccggaggaaaggccgtttttggaccaacctcaaggacttccgttgcgcatgtgcaatctata tgtaactttcttgcaattccacatataaagtttcattgggatccttatgacatcaatattggaacacgtgatccaggaaa aactcatatgtcaattaatgtatatcctcattacataaaaataagtgaagcgtatcgtgatttaattaaccactggggat ggacgacatttacagtgatttacgaagacaacgatggtttaataagattacaagaggttctaaagacatcgaaaaaagag aacatgaaagtgacggtgcgaaaacttgataggaatccagacaactttataaagatgtttaaagacataaaactaaagaa tgaaaaccgattcattatagactgtcatgtcagtaaggttggaacagttttacataaggcttctcaagtcaacgtcatca gcgaatattttcattacctctttacaacattggatttagccatggtagatttggagaatttcaaacataatggtgccaac atcacagcgctgaggatagtaaaccctgagaatcctatagtatcagcggtgacaggggagtggaagtacgagatgttcag atctagtagaaacaaccaagtttctccactcagcgcaaatcagaaacaagtatcgaagtcgacatactttcctaagaatg acaccgatgtgtttccgacggagaatgcgatgatgtatgatgctgtgatggtattcgatcaggcgttagagaggctgctc aaagcccacaacatggactttgacaaaaagctgagctgtaatggcacagagacatggagtgagggatccagtctgttaaa ctacatgaagacgatggattttgaaggcatgacaggacgagtccatttcggtgaatttggtctcaggaatgagttttcat tggatattattgatatgacagtgaatggccttgaaaagtccggcgtctggtattctacccaaccggaaggaaagcgcatt aatataacaaaatcacaagtcgaaagaaaagatgacaatctgagtaagattaaaggcaaaagactgaaagttatcactaa aacggatgcgccttatgtatttgatgacaaggagacttatccggatgggaggataagatacacagggtttgcttttaaca tttttgaccttatcgccaaaagactgaatttttcttacgacgtcgtaggaagtacaacgtcttatggaaattgtaatgat cagggggtatgtgacggaatgatggactatctctataataagtcagttgatgtagccgttgccggaatgactattaccta tgaaagagagaaatttgtggacttcaccaaaccattcctgaatctcggtataaccattctgtacaggaaaccaaaaccag aaccaccagctttgttctcatttctgaaccctctccacctagacgtctggatctacatgatagcggggattctatgtgtc agcttcatgttgtttgtcatagctcgattcactccttatgaatggtgtaatccccatccttgtgatcccaataccgacgt ggtggaaaatcagttctccatcctcaacagtttatggttcacggttggagctcttatgcagcaaggttgtgagattgcac ctagggcagtgtccacacgtatggtggcggtggtatggtggtttttcactctcatcatgatatcctcttacaccgccaat ctggcggccttcttgacggtaaccaggatggtctcacccatagagagtgcagaggatctggctaaacaaaccaagatcaa gtatggaacactagaaaatggcagtactcaaaagttttttgagcaatcacaatttccaacctttcagaaaatgtacagtt ttatgaaggatcaaaaattgtttgtgagatcagctcaagaaggttataacaaggttctgaacgaagaatatgcatatttt gctgaatccccttctatagaataccagatccaaaggaaatgtgatcttatgcagataggaaactggttaaattccatagg atatggtattgcatttccaagaaattctccttggagggatcaaatatcaaatgaaattctgcggcttcaagaggcccagg agatacagcggctcttcaacttgtggtggaaggagttagacggaggaggtaaatgtacagaggaaaccaagaagattagt gctgccctcaccatagataacgtgggtggagtatttgtgctgttggtcggggggttgcctggcggggctgttagtggccc tttttga |
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| Transcript ID | pfu_aug2.0_895.1_17912.t2 |
| Definition | - |
>pfu_aug2.0_895.1_17912.t2 atggagaaaactggtttatttgaaccagaaaacgttggtgctaagataacgttcagatggacgatccagaagttaaacct tcagggtgataacgacattgtcatagtttcaaatccaatagacattgccaaagatgacagcttccaagtttcaaaacgag tatgtagtgacattgaggccggaggaaaggccgtttttggaccaacctcaaggacttccgttgcgcatgtgcaatctata tgtaactttcttgcaattccacatataaagtttcattgggatccttatgacatcaatattggaacacgtgatccaggaaa aactcatatgtcaattaatgtatatcctcattacataaaaataagtgaagcgtatcgtgatttaattaaccactggggat ggacgacatttacagtgatttacgaagacaacgatggtttaataagattacaagaggttctaaagacatcgaaaaaagag aacatgaaagtgacggtgcgaaaacttgataggaatccagacaactttataaagatgtttaaagacataaaactaaagaa tgaaaaccgattcattatagactgtcatgtcagtaaggttggaacagttttacataaggcttctcaagtcaacgtcatca gcgaatattttcattacctctttacaacattggatttagccatggtagatttggagaatttcaaacataatggtgccaac atcacagcgctgaggatagtaaaccctgagaatcctatagtatcagcggtgacaggggagtggaagtacgagatgttcag atctagtagaaacaaccaagtttctccactcagcgcaaatcagaaacaagttatataccacagagaaactctgacagaag taaataaacatttgaaattttcacaagaagatgagatgaaaacgctgtatgtagatcttagccattgctacatagagggg aaaaccggtcacagattcaaaaagtcgacatactttcctaagaatgacaccgatgtgtttccgacggagaatgcgatgat gtatgatgctgtgatggtattcgatcaggcgttagagaggctgctcaaagcccacaacatggactttgacaaaaagctga gctgtaatggcacagagacatggagtgagggatccagtctgttaaactacatgaagacgatggattttgaaggcatgaca ggacgagtccatttcggtgaatttggtctcaggaatgagttttcattggatattattgatatgacagtgaatggccttga aaagtccggcgtctggtattctacccaaccggaaggaaagcgcattaatataacaaaatcacaagtcgaaagaaaagatg acaatctgagtaagattaaaggcaaaagactgaaagttatcactaaaacggatgcgccttatgtatttgatgacaaggag acttatccggatgggaggataagatacacagggtttgcttttaacatttttgaccttatcgccaaaagactgaatttttc ttacgacgtcgtaggaagtacaacgtcttatggaaattgtaatgatcagggggtatgtgacggaatgatggactatctct ataataagtcagttgatgtagccgttgccggaatgactattacctatgaaagagagaaatttgtggacttcaccaaacca ttcctgaatctcggtataaccattctgtacaggaaaccaaaaccagaaccaccagctttgttctcatttctgaaccctct ccacctagacgtctggatctacatgatagcggggattctatgtgtcagcttcatgttgtttgtcatagctcgattcactc cttatgaatggtgtaatccccatccttgtgatcccaataccgacgtggtggaaaatcagttctccatcctcaacagttta tggttcacggttggagctcttatgcagcaaggttgtgagattgcacctagggcagtgtccacacgtatggtggcggtggt atggtggtttttcactctcatcatgatatcctcttacaccgccaatctggcggccttcttgacggtaaccaggatggtct cacccatagagagtgcagaggatctggctaaacaaaccaagatcaagtatggaacactagaaaatggcagtactcaaaag ttttttgagcaatcacaatttccaacctttcagaaaatgtacagttttatgaaggatcaaaaattgtttgtgagatcagc tcaagaaggttataacaaggttctgaacgaagaatatgcatattttgctgaatccccttctatagaataccagatccaaa ggaaatgtgatcttatgcagataggaaactggttaaattccataggatatggtattgcatttccaagaaattctccttgg agggatcaaatatcaaatgaaattctgcggcttcaagaggcccaggagatacagcggctcttcaacttgtggtggaagga gttagacggaggaggtaaatgtacagaggaaaccaagaagattagtgctgccctcaccatagataacgtgggtggagtat ttgtgctgttggtcggggggttgcctggcggggctgttagtggccctttttga |
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Protein
| Protein ID | pfu_aug2.0_895.1_17912.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_895.1_17912.t1 MEKTGLFEPENVGAKITFRWTIQKLNLQGDNDIVIVSNPIDIAKDDSFQVSKRVCSDIEAGGKAVFGPTSRTSVAHVQSI CNFLAIPHIKFHWDPYDINIGTRDPGKTHMSINVYPHYIKISEAYRDLINHWGWTTFTVIYEDNDGLIRLQEVLKTSKKE NMKVTVRKLDRNPDNFIKMFKDIKLKNENRFIIDCHVSKVGTVLHKASQVNVISEYFHYLFTTLDLAMVDLENFKHNGAN ITALRIVNPENPIVSAVTGEWKYEMFRSSRNNQVSPLSANQKQVSKSTYFPKNDTDVFPTENAMMYDAVMVFDQALERLL KAHNMDFDKKLSCNGTETWSEGSSLLNYMKTMDFEGMTGRVHFGEFGLRNEFSLDIIDMTVNGLEKSGVWYSTQPEGKRI NITKSQVERKDDNLSKIKGKRLKVITKTDAPYVFDDKETYPDGRIRYTGFAFNIFDLIAKRLNFSYDVVGSTTSYGNCND QGVCDGMMDYLYNKSVDVAVAGMTITYEREKFVDFTKPFLNLGITILYRKPKPEPPALFSFLNPLHLDVWIYMIAGILCV SFMLFVIARFTPYEWCNPHPCDPNTDVVENQFSILNSLWFTVGALMQQGCEIAPRAVSTRMVAVVWWFFTLIMISSYTAN LAAFLTVTRMVSPIESAEDLAKQTKIKYGTLENGSTQKFFEQSQFPTFQKMYSFMKDQKLFVRSAQEGYNKVLNEEYAYF AESPSIEYQIQRKCDLMQIGNWLNSIGYGIAFPRNSPWRDQISNEILRLQEAQEIQRLFNLWWKELDGGGKCTEETKKIS AALTIDNVGGVFVLLVGGLPGGAVSGPF |
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| Protein ID | pfu_aug2.0_895.1_17912.t2 |
| Definition | - |
>pfu_aug2.0_895.1_17912.t2 MEKTGLFEPENVGAKITFRWTIQKLNLQGDNDIVIVSNPIDIAKDDSFQVSKRVCSDIEAGGKAVFGPTSRTSVAHVQSI CNFLAIPHIKFHWDPYDINIGTRDPGKTHMSINVYPHYIKISEAYRDLINHWGWTTFTVIYEDNDGLIRLQEVLKTSKKE NMKVTVRKLDRNPDNFIKMFKDIKLKNENRFIIDCHVSKVGTVLHKASQVNVISEYFHYLFTTLDLAMVDLENFKHNGAN ITALRIVNPENPIVSAVTGEWKYEMFRSSRNNQVSPLSANQKQVIYHRETLTEVNKHLKFSQEDEMKTLYVDLSHCYIEG KTGHRFKKSTYFPKNDTDVFPTENAMMYDAVMVFDQALERLLKAHNMDFDKKLSCNGTETWSEGSSLLNYMKTMDFEGMT GRVHFGEFGLRNEFSLDIIDMTVNGLEKSGVWYSTQPEGKRINITKSQVERKDDNLSKIKGKRLKVITKTDAPYVFDDKE TYPDGRIRYTGFAFNIFDLIAKRLNFSYDVVGSTTSYGNCNDQGVCDGMMDYLYNKSVDVAVAGMTITYEREKFVDFTKP FLNLGITILYRKPKPEPPALFSFLNPLHLDVWIYMIAGILCVSFMLFVIARFTPYEWCNPHPCDPNTDVVENQFSILNSL WFTVGALMQQGCEIAPRAVSTRMVAVVWWFFTLIMISSYTANLAAFLTVTRMVSPIESAEDLAKQTKIKYGTLENGSTQK FFEQSQFPTFQKMYSFMKDQKLFVRSAQEGYNKVLNEEYAYFAESPSIEYQIQRKCDLMQIGNWLNSIGYGIAFPRNSPW RDQISNEILRLQEAQEIQRLFNLWWKELDGGGKCTEETKKISAALTIDNVGGVFVLLVGGLPGGAVSGPF |
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