Gene
| Gene Model ID | pfu_aug2.0_9.1_29937 |
|---|---|
| Locus | scaffold9.1 : 90646 ... 133457 : + |
| To GenomeBrowser | scaffold9.1:90646..133457 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_32901.1_04835 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29937.t1 | 1 | 1 | adh_short | 30 | 201 | 7.9e-25 | 87.7 | 5.0e-28 | 1.1e-24 | 87.2 |
| pfu_aug2.0_9.1_29937.t1 | 1 | 1 | KR | 32 | 199 | 1.5e-06 | 28.0 | 2.7e-09 | 5.8e-06 | 26.0 |
| pfu_aug2.0_9.1_29937.t1 | 1 | 1 | adh_short_C2 | 38 | 200 | 4.0e-10 | 39.8 | 2.5e-13 | 5.3e-10 | 39.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9.1_29937.t1 | gi|676432922|ref|XP_009046732.1| | hypothetical protein LOTGIDRAFT_138116 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_9.1_29937.t1 | gi|641763547|ref|XP_008167032.1| | PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_9.1_29937.t1 | gi|558104598|ref|XP_006110568.1| | PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_9.1_29937.t1 | gi|157743316|ref|NP_001099077.1| | short-chain dehydrogenase/reductase 10 precursor [Danio rerio] | 0.0 |
| pfu_aug2.0_9.1_29937.t1 | gi|558142554|ref|XP_006118819.1| | PREDICTED: corticosteroid 11-beta-dehydrogenase isozyme 1-like isoform X1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29937.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29937.t1 atgtggaagaagattttggcccttgtattcggtgtcattgtcggactctggctgatagatgatttcaatccagatgtgct aaagggaaagaatgtggtcatcactggggcatcggcggggatcggggagcagatggcgtatcactatgccaggatgggtg ctaatgttctagtcacagcacgcagacaaaacgtcctgaaaaaggtcgtagaacgttgcagggaggaaggtggaaaagat gggaaatacttttacatagccgctgatatggccaatctgtcatccactgttactgtgataaatgaagcaatttccaaatt aggcagcatagattatttggtgctgaaccatatcataccgataccccttggactctgggaggggacgtctcaaaacctct ccctggcaaacacaatcattgacgtcaactttaaagcttatgttcatttagcatcacacgctctacctcatctaaaacat actcatggaagcataatagttgtctcatctttagcaggtaaaatcggtcaaccctttactgcaatatactcatctacaaa atttgcattagatggcttctttggtggcttacgtcaggaactcatcttgaagaaatgtgatatatctatcacactgtgcg ttctaggtcttataggtacagagagcgcagtaacagaactgaagaacattggtcaggattatctgttgagcgccatcaag ccggccagtccgtccagtgctgccttagctatcataaaaggaggcacaaatcgtcagcgagaagtccatttcccctactg ggagctacgggtattcactttgtttagagactggtttccagagagtgtagaatatgtaaacaggatgtttttcactgtca attcctag |
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Protein
| Protein ID | pfu_aug2.0_9.1_29937.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29937.t1 MWKKILALVFGVIVGLWLIDDFNPDVLKGKNVVITGASAGIGEQMAYHYARMGANVLVTARRQNVLKKVVERCREEGGKD GKYFYIAADMANLSSTVTVINEAISKLGSIDYLVLNHIIPIPLGLWEGTSQNLSLANTIIDVNFKAYVHLASHALPHLKH THGSIIVVSSLAGKIGQPFTAIYSSTKFALDGFFGGLRQELILKKCDISITLCVLGLIGTESAVTELKNIGQDYLLSAIK PASPSSAALAIIKGGTNRQREVHFPYWELRVFTLFRDWFPESVEYVNRMFFTVNS |
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