Gene
| Gene Model ID | pfu_aug2.0_9.1_29942 |
|---|---|
| Locus | scaffold9.1 : 247528 ... 259390 : + |
| To GenomeBrowser | scaffold9.1:247528..259390 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_27673.1_19192 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29942.t1 | 2 | 1 | Peptidase_M1 | 1 | 48 | 1.0e-24 | 87.4 | 3.9e-25 | 1.4e-21 | 77.0 |
| pfu_aug2.0_9.1_29942.t1 | 2 | 1 | Peptidase_MA_2 | 3 | 48 | 3.2e-09 | 36.8 | 5.1e-08 | 0.00019 | 21.4 |
| pfu_aug2.0_9.1_29942.t1 | 2 | 2 | Peptidase_M1 | 51 | 69 | 1.0e-24 | 87.4 | 0.00014 | 0.52 | 9.3 |
| pfu_aug2.0_9.1_29942.t1 | 2 | 2 | Peptidase_MA_2 | 58 | 92 | 3.2e-09 | 36.8 | 2.2e-05 | 0.083 | 12.9 |
| pfu_aug2.0_9.1_29942.t1 | 1 | 1 | ERAP1_C | 204 | 517 | 0.0 | 235.8 | 0.0 | 0.0 | 235.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9.1_29942.t1 | gi|676478198|ref|XP_009061355.1| | hypothetical protein LOTGIDRAFT_204438 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_9.1_29942.t1 | gi|675660536|ref|XP_008995716.1| | PREDICTED: puromycin-sensitive aminopeptidase isoform X2 [Callithrix jacchus] | 0.0 |
| pfu_aug2.0_9.1_29942.t1 | gi|725575950|ref|XP_010340126.1| | PREDICTED: puromycin-sensitive aminopeptidase isoform X2 [Saimiri boliviensis boliviensis] | 0.0 |
| pfu_aug2.0_9.1_29942.t1 | gi|524864078|ref|XP_005088877.1| | PREDICTED: puromycin-sensitive aminopeptidase-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_9.1_29942.t1 | gi|524864076|ref|XP_005088876.1| | PREDICTED: puromycin-sensitive aminopeptidase-like isoform X2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29942.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29942.t1 atggagaattggggtttagtgacatacagagagacagcactgcttattgatcctgagaattcctcagctaagactaaaca atgggtggcattggtggtaggtcatgaaatagctcatcagtggtttggaaaccttgtaactatggtaccagtgggacatc cagatgaagtagatgagatttttgatgctatctcttacagtaaaggagcatctgtcatcagaatgcttcatgattatatt ggtgacgaggacttcaggaaaggtatgaatcagtatctaaccaagttcaaatacagcaatgcttttactgaggatctttg ggactctctgcaagatgccagtggtaaacctgtacataaagtcatgaatacatggacaaaacaaatgggttatcccgtca tcaaggttactgagaggcaagatggagacaaacgagtcatgacactttcacaggagaagttttgtgcagatggaaaacaa cctgaaggtactagtagttatgaatggatggtacctgtcactataatgagtaaaagcaaaggtgttaaaaaagtccttct tgaaaaacccagcatggaggtcacactagacaatgtcaaggcaggtgattgggtcaaggttaacagtggaacagtgggag tgtacagagtacagtatacatcagagtccttagaacgttttataccagccattaaagataaaagtttaccagcaaccgat agacttggacttcagagtgacctttttgcattggcgagggcaggtatggtgtcggctgtagatgtcctaaaggtagccga ggcatacattaacgaggataactatactgtatggagtgacctgggtatgagcctgggaggagtgggaatcatcctacaga acacagacagctatgataagtacaaggcattcactaggaaactgtttaagcctgtagccgactccgtgggatgggacccc aaggctgatgaaggtcccttggtagccatgttaagagacctcgccctaggtaagcttggtcgtagtaatgatgaagccac cgtagccgaagccaggaagagatttgatgcccacgttgctgggacaaccacactgtctgctgatcttaaaagtccagtat atagtatagtgatgtcaaacggtgatcaggaagcatatgataagatgatgaagttgtatgatggtgcagacatgcaggag gagaaagtaagaataagtcgacttctgggctcaataaaggatgttaacttgaagaaaaaagttctggagtttgccatgtc tgataaagtgagatcacaggacacagtgtttgtgatttctggtgtaactaatacagtagagggtagagagttggtgtggc agtttgtacaggataactggtccacattaatagaaagatacagcggtggattcctgttgtcacggcttgtcaagattgcc actgaaaattttatcacagatgaaagagcaaaagaaatagagaaattctttgcagcacatccagcacctgctgccgagag aacaatccaacaatccgtagagaacatacaattaaacgagaaatggatgaatgaaaatgccactagggttacagaattcc tgaagtcttactaa |
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Protein
| Protein ID | pfu_aug2.0_9.1_29942.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29942.t1 MENWGLVTYRETALLIDPENSSAKTKQWVALVVGHEIAHQWFGNLVTMVPVGHPDEVDEIFDAISYSKGASVIRMLHDYI GDEDFRKGMNQYLTKFKYSNAFTEDLWDSLQDASGKPVHKVMNTWTKQMGYPVIKVTERQDGDKRVMTLSQEKFCADGKQ PEGTSSYEWMVPVTIMSKSKGVKKVLLEKPSMEVTLDNVKAGDWVKVNSGTVGVYRVQYTSESLERFIPAIKDKSLPATD RLGLQSDLFALARAGMVSAVDVLKVAEAYINEDNYTVWSDLGMSLGGVGIILQNTDSYDKYKAFTRKLFKPVADSVGWDP KADEGPLVAMLRDLALGKLGRSNDEATVAEARKRFDAHVAGTTTLSADLKSPVYSIVMSNGDQEAYDKMMKLYDGADMQE EKVRISRLLGSIKDVNLKKKVLEFAMSDKVRSQDTVFVISGVTNTVEGRELVWQFVQDNWSTLIERYSGGFLLSRLVKIA TENFITDERAKEIEKFFAAHPAPAAERTIQQSVENIQLNEKWMNENATRVTEFLKSY |
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