Gene
| Gene Model ID | pfu_aug2.0_9.1_29943 |
|---|---|
| Locus | scaffold9.1 : 260482 ... 261167 : - |
| To GenomeBrowser | scaffold9.1:260482..261167 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29943.t1 | 1 | 1 | TNF | 32 | 157 | 4.4e-13 | 48.8 | 8.5e-17 | 6.3e-13 | 48.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9.1_29943.t1 | gi|557013438|ref|XP_006007257.1| | PREDICTED: uncharacterized protein LOC102360773, partial [Latimeria chalumnae] | 4.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29943.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29943.t1 atggactttcagcttaagccaacagccaaactgaatggtgccaaagatacgtcatcacgccatgttgtaccacataatgg aatgacgtcattactatcatggcataacggaaacgactgtcacatgtctaacggtatgttatacagagacgggcggctta cagttcctctagatgggatgtattttatatatggacaacttgaagtgtcatttgacaaacacaacaacgacaacaacacg agcggacagtatcaagtagagatgacaaagagtaacatattttacggtgaacataccttatttaggtactcggtaccaga tgttgtatttctcagtcctgctactagttctatagacgtgtgtatagcttctacagtcagactgagggcacaggacgaac tctatatcagggtcagcgatacagaaaacctttataatccagccaataactttataggtgcatatatgctttaa |
|
Protein
| Protein ID | pfu_aug2.0_9.1_29943.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29943.t1 MDFQLKPTAKLNGAKDTSSRHVVPHNGMTSLLSWHNGNDCHMSNGMLYRDGRLTVPLDGMYFIYGQLEVSFDKHNNDNNT SGQYQVEMTKSNIFYGEHTLFRYSVPDVVFLSPATSSIDVCIASTVRLRAQDELYIRVSDTENLYNPANNFIGAYML |
|