Gene
| Gene Model ID | pfu_aug2.0_9.1_29951 |
|---|---|
| Locus | scaffold9.1 : 509275 ... 515250 : - |
| To GenomeBrowser | scaffold9.1:509275..515250 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_6337.1_31168 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29951.t1 | 2 | 1 | DUF1126 | 148 | 181 | 2.1e-34 | 116.6 | 6.8e-18 | 1.0e-13 | 50.5 |
| pfu_aug2.0_9.1_29951.t1 | 2 | 2 | DUF1126 | 348 | 380 | 2.1e-34 | 116.6 | 6.3e-22 | 9.4e-18 | 63.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9.1_29951.t1 | gi|676426102|ref|XP_009044516.1| | hypothetical protein LOTGIDRAFT_211798 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_9.1_29951.t1 | gi|291231836|ref|XP_002735862.1| | PREDICTED: EF-hand domain-containing family member C2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_9.1_29951.t1 | gi|524879471|ref|XP_005096411.1| | PREDICTED: EF-hand domain-containing family member C2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_9.1_29951.t1 | gi|72100638|ref|XP_798540.1| | PREDICTED: EF-hand domain-containing family member C2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_9.1_29951.t1 | gi|115653418|ref|XP_791515.2| | PREDICTED: EF-hand domain-containing family member C2, partial [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29951.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29951.t1 atgttggaactctctttgagttgtgactggaagaagaaatcctttcatctagcaacacacaaagatattgggtacagaac gttgataagaagacatagaatacccaaacctgcacctaatgatgacgagtactatactgccgaggacttcaatatcggaa aagaaatcaatctatattccaaagttttcaaaatcacaggatcagatgactttactaagaatttcctcaagaaaatggga gtcagagttaatgaggctgttgatagtccagataatccatatacaaagtacagaaaagctatggatgaaagcatgcagcc attaagaccatatgagaagcatgacacactcaaacagttcttagaccatgaccgtcacgtcctacgtttctactgttact gggacgacacagacagtatgtttggagatccaagggagcttatcttgcactatttcttagctgatgatactattgaaatc agagaggtcatacctgcaaactccggacgagatgccgttccgatgttcctgcagcgtggaaaactgcccaaaaacataga atccctgcgacagccaggagaaatcacagaccgcacggtactgaatgtgtttggaccaactggacatggtggcagataca tccttgatagcttgaagactggtgccgtgtacacagatttctacagggacagtgaccttacattgggagctgttctcaat gtttggggaaggaaggtccttatatgtgactgtgatgagtttactaaggaatattatagaaacaaatttgggcttgaaac attcccaagtgtcgaatacaaaaaggatcctatgggcatgggacctcgccagttccctccatacaatggctggggcagtg aggaggattctctttgctcttgtatgggtctccttccaaagcctccaaagagggactttatcaagtttatggagaaggac aggagaggattggatagtaacgtactgagattcctggcacgtatggataccaccaaacccattgacatggataggcgatt catcatctcctacttcctctctgatgacaccatcttagtctttgagcctccagttagaaattcaggtatcattggaggta aattccttgaaagaactagaatcaagaagcccaatcagccgttatacagtacagatatgtcccaatactacctagcttct gacttgcatgtaggagctaacgtcacattcaacagtcataaatttgttctcattgatgctgatgaatatgcatttaggta catggaggctcatgctggtgagttttcaaaggccaacattaatgcgatcttgaagaaactagtttcaatagtaggaaaga acccagatgaagtacgttccttcttcatgaagaacgatccaaaaggatgcggcacgatcggatacgaccagctagtctct ctgctgagacaagttgaccccacaatcacaaatcatgaggttatgactgtggccagatattattctgaaagaactgctga agatgctgtggacagccgaaaactagtggcaatagttcaagaacaactcagaaaacgaaattatgaaggatttggaaaac ttttggaagactgcatgcagaacgatcaagcaaagagtggtaccttggatgctgaggtcgtcagaaccattgtccatgct caccatgtacccttaccagatgatttactgagagctgccctttcattagctgtagcaaatgagcaaggagcaattgatta caaatccctgatagcccagatgaactggagggattcacctgtccccccaatgcaagtagaaccttcatcagatcccaact ggcaggggacgtcacaaggaaacaacagtgtatccgtggtcaactatcagaatctccttgatgactgttttggaaaagct aaacctgagtcataa |
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Protein
| Protein ID | pfu_aug2.0_9.1_29951.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29951.t1 MLELSLSCDWKKKSFHLATHKDIGYRTLIRRHRIPKPAPNDDEYYTAEDFNIGKEINLYSKVFKITGSDDFTKNFLKKMG VRVNEAVDSPDNPYTKYRKAMDESMQPLRPYEKHDTLKQFLDHDRHVLRFYCYWDDTDSMFGDPRELILHYFLADDTIEI REVIPANSGRDAVPMFLQRGKLPKNIESLRQPGEITDRTVLNVFGPTGHGGRYILDSLKTGAVYTDFYRDSDLTLGAVLN VWGRKVLICDCDEFTKEYYRNKFGLETFPSVEYKKDPMGMGPRQFPPYNGWGSEEDSLCSCMGLLPKPPKRDFIKFMEKD RRGLDSNVLRFLARMDTTKPIDMDRRFIISYFLSDDTILVFEPPVRNSGIIGGKFLERTRIKKPNQPLYSTDMSQYYLAS DLHVGANVTFNSHKFVLIDADEYAFRYMEAHAGEFSKANINAILKKLVSIVGKNPDEVRSFFMKNDPKGCGTIGYDQLVS LLRQVDPTITNHEVMTVARYYSERTAEDAVDSRKLVAIVQEQLRKRNYEGFGKLLEDCMQNDQAKSGTLDAEVVRTIVHA HHVPLPDDLLRAALSLAVANEQGAIDYKSLIAQMNWRDSPVPPMQVEPSSDPNWQGTSQGNNSVSVVNYQNLLDDCFGKA KPES |
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