Gene
| Gene Model ID | pfu_aug2.0_9.1_29952 |
|---|---|
| Locus | scaffold9.1 : 516361 ... 543148 : + |
| To GenomeBrowser | scaffold9.1:516361..543148 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_18806.1_32951 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29952.t1 | 3 | 1 | BACK | 40 | 57 | 4.7e-26 | 90.6 | 0.48 | 790.0 | -0.1 |
| pfu_aug2.0_9.1_29952.t1 | 2 | 1 | BTB | 43 | 148 | 2.8e-25 | 88.4 | 1.8e-28 | 3.0e-25 | 88.3 |
| pfu_aug2.0_9.1_29952.t1 | 6 | 1 | Kelch_6 | 127 | 142 | 1.3e-30 | 104.2 | 4.2 | 6900.0 | -2.5 |
| pfu_aug2.0_9.1_29952.t1 | 3 | 2 | BACK | 127 | 150 | 4.7e-26 | 90.6 | 2.6 | 4300.0 | -2.5 |
| pfu_aug2.0_9.1_29952.t1 | 3 | 3 | BACK | 155 | 254 | 4.7e-26 | 90.6 | 2.9e-29 | 4.7e-26 | 90.6 |
| pfu_aug2.0_9.1_29952.t1 | 2 | 2 | BTB | 239 | 282 | 2.8e-25 | 88.4 | 0.42 | 700.0 | 0.2 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 1 | Kelch_5 | 339 | 384 | 6.9e-18 | 64.1 | 0.00017 | 0.28 | 11.1 |
| pfu_aug2.0_9.1_29952.t1 | 6 | 2 | Kelch_6 | 347 | 392 | 1.3e-30 | 104.2 | 4.7e-05 | 0.078 | 13.1 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 1 | Kelch_1 | 349 | 396 | 6.44597e-44 | 147.2 | 0.00073 | 1.2 | 8.7 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 1 | Kelch_2 | 349 | 394 | 1.1e-15 | 56.7 | 0.001 | 1.7 | 8.5 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 1 | Kelch_4 | 351 | 363 | 3.0e-25 | 87.7 | 0.27 | 440.0 | 0.7 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 1 | Kelch_3 | 353 | 406 | 2.8e-23 | 81.4 | 0.00048 | 0.78 | 9.9 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 2 | Kelch_5 | 399 | 434 | 6.9e-18 | 64.1 | 1.3e-06 | 0.0022 | 17.9 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 2 | Kelch_1 | 400 | 444 | 6.44597e-44 | 147.2 | 2.1e-14 | 3.4e-11 | 42.4 |
| pfu_aug2.0_9.1_29952.t1 | 6 | 3 | Kelch_6 | 400 | 446 | 1.3e-30 | 104.2 | 3.0e-08 | 4.9e-05 | 23.3 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 2 | Kelch_4 | 400 | 444 | 3.0e-25 | 87.7 | 1.0e-07 | 0.00017 | 21.2 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 2 | Kelch_2 | 408 | 444 | 1.1e-15 | 56.7 | 0.0013 | 2.2 | 8.2 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 2 | Kelch_3 | 410 | 454 | 2.8e-23 | 81.4 | 2.1e-06 | 0.0034 | 17.4 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 3 | Kelch_5 | 445 | 480 | 6.9e-18 | 64.1 | 3.7e-05 | 0.061 | 13.3 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 3 | Kelch_1 | 448 | 491 | 6.44597e-44 | 147.2 | 7.1e-14 | 1.2e-10 | 40.7 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 3 | Kelch_4 | 449 | 490 | 3.0e-25 | 87.7 | 2.0e-11 | 3.2e-08 | 33.2 |
| pfu_aug2.0_9.1_29952.t1 | 6 | 4 | Kelch_6 | 450 | 494 | 1.3e-30 | 104.2 | 7.6e-12 | 1.2e-08 | 34.6 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 3 | Kelch_2 | 451 | 490 | 1.1e-15 | 56.7 | 4.2e-08 | 6.9e-05 | 22.4 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 3 | Kelch_3 | 457 | 502 | 2.8e-23 | 81.4 | 6.3e-12 | 1.0e-08 | 35.0 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 4 | Kelch_1 | 493 | 549 | 6.44597e-44 | 147.2 | 3.1e-14 | 5.2e-11 | 41.9 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 4 | Kelch_4 | 493 | 549 | 3.0e-25 | 87.7 | 9.6e-09 | 1.6e-05 | 24.5 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 4 | Kelch_2 | 494 | 549 | 1.1e-15 | 56.7 | 3.8e-05 | 0.063 | 13.0 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 4 | Kelch_5 | 497 | 514 | 6.9e-18 | 64.1 | 0.00012 | 0.2 | 11.6 |
| pfu_aug2.0_9.1_29952.t1 | 6 | 5 | Kelch_6 | 498 | 551 | 1.3e-30 | 104.2 | 3.1e-08 | 5.0e-05 | 23.2 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 4 | Kelch_3 | 504 | 558 | 2.8e-23 | 81.4 | 0.0003 | 0.49 | 10.6 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 5 | Kelch_5 | 549 | 571 | 6.9e-18 | 64.1 | 0.014 | 22.0 | 5.1 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 5 | Kelch_1 | 551 | 572 | 6.44597e-44 | 147.2 | 0.0026 | 4.3 | 6.9 |
| pfu_aug2.0_9.1_29952.t1 | 6 | 6 | Kelch_6 | 553 | 598 | 1.3e-30 | 104.2 | 0.0058 | 9.6 | 6.5 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 5 | Kelch_4 | 560 | 573 | 3.0e-25 | 87.7 | 0.028 | 46.0 | 3.8 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 5 | Kelch_3 | 562 | 572 | 2.8e-23 | 81.4 | 0.28 | 460.0 | 1.1 |
| pfu_aug2.0_9.1_29952.t1 | 5 | 5 | Kelch_2 | 564 | 595 | 1.1e-15 | 56.7 | 0.53 | 870.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9.1_29952.t1 | gi|524914029|ref|XP_005111835.1| | PREDICTED: kelch-like protein 20-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_9.1_29952.t1 | gi|676430891|ref|XP_009046075.1| | hypothetical protein LOTGIDRAFT_137657 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_9.1_29952.t1 | gi|585692734|ref|XP_006821508.1| | PREDICTED: ring canal kelch protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_9.1_29952.t1 | gi|390340684|ref|XP_003725292.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29952.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29952.t1 atgagtggagacccagcatcaagccctgactccatgttagatggacagtcatctatctgtgacacgcccagctccccaga cgacaggtttgtcgatgaggacaggtcgatgaaacttttacaaggattctccaagctttataaggatcaagaatttgtgg atgtaacactttgtgtggaggatacagaatttccctgccataagaatgtgcttgccgtgtccagcccattcttcatggcg atgttctcatcaaatttggccgaaagtcagcaggataaaattccgttaaaggaacttgactcgcaaactatgagccttgt tttggattacatatacacaggacaagtcatgctgtctgaggacactgttcagcatcttctttcagcatccaacagatttc aactgatttcactacgcagcggttgtgcagagttcatgatgaaccacataacagtgtcaaattgtattggtgtctacttc tttgctattgctcatgaatgtaaggtgcttgccatgaaagccaaagaaataataaacaatcagttctctgtgctctgtaa gcagcaagagttcctatcactacctgcagacaaactggtagagataatcagcgatgatgaaatcaatgttggacttgagg agacggtgttcgaagcttgcatggactggttacaaatcgagcctactgacagactccagcacttggtctccataatgaac tgtgtcaggtttgccaatataagctcatattacttctgtgataagatagacacaaatctagtcttgaagcagagtgagaa gttacgacaaactttagatactgtacggtactatcacatgctacgcaatcgacagcaggaaatggatttgaatctcatgc cacgtggcggaatgtcatacgagcgggcagtgatgattattgccaacccgtacacagaggaatctcttaagaagtataac agtatggaaatgttgctgcctaaaacaggagaggttataaatatatgtaaactaccacaaagcttatatactccaggatg tgcaataactggagagaaccagatctacctggctgggggtgccataaggaagataaattatagaggctccattactactg agggcgtatctaacaacttctatgtgtttgatcagatagagaaaaactggcagtccaaggccaaaatgcacatgtctcga tcacagttctgtttgactatagtggatggatatgcttttgctattggtggccaagatgggacagagatactaagtacagt ggaacgatatgactcaaatacgaatgcttggatgctcgttgctccacttccgaagcctctacgatttatgacgtcaacaa gtcataaaggcaagctgtatgtctttggaggagaatcaaccagtgatgtcagtagttcaggtttcagatatgacccagca aatgatgaatggacagagttacctcctttgaatactccacgagtgctagcaggaagcgttgtttacaaagataaaatcta tgtcattggtggtaactcagctataagtgaaaaatggaaaaaggaatttctacccgagcattgtgtcagtactgttgaaa tctttgatcctaccaacgagaaatggagtccgggaccagagctgccgaatgctctatgtggtgcaggtatagtcaagtac agtaatacgatcctgatcgtgggaggagaggatgataagagttggatggctggactatgctggctaaaggatgataacgg caaacagtcatgggtcgaaggacaggagctaccgacagtgatgagcacatttggttgtgttgtggccaatattcaacatg aagtgtttaaacaggaatga |
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Protein
| Protein ID | pfu_aug2.0_9.1_29952.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29952.t1 MSGDPASSPDSMLDGQSSICDTPSSPDDRFVDEDRSMKLLQGFSKLYKDQEFVDVTLCVEDTEFPCHKNVLAVSSPFFMA MFSSNLAESQQDKIPLKELDSQTMSLVLDYIYTGQVMLSEDTVQHLLSASNRFQLISLRSGCAEFMMNHITVSNCIGVYF FAIAHECKVLAMKAKEIINNQFSVLCKQQEFLSLPADKLVEIISDDEINVGLEETVFEACMDWLQIEPTDRLQHLVSIMN CVRFANISSYYFCDKIDTNLVLKQSEKLRQTLDTVRYYHMLRNRQQEMDLNLMPRGGMSYERAVMIIANPYTEESLKKYN SMEMLLPKTGEVINICKLPQSLYTPGCAITGENQIYLAGGAIRKINYRGSITTEGVSNNFYVFDQIEKNWQSKAKMHMSR SQFCLTIVDGYAFAIGGQDGTEILSTVERYDSNTNAWMLVAPLPKPLRFMTSTSHKGKLYVFGGESTSDVSSSGFRYDPA NDEWTELPPLNTPRVLAGSVVYKDKIYVIGGNSAISEKWKKEFLPEHCVSTVEIFDPTNEKWSPGPELPNALCGAGIVKY SNTILIVGGEDDKSWMAGLCWLKDDNGKQSWVEGQELPTVMSTFGCVVANIQHEVFKQE |
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