Gene
| Gene Model ID | pfu_aug2.0_9.1_29955 |
|---|---|
| Locus | scaffold9.1 : 561241 ... 564330 : + |
| To GenomeBrowser | scaffold9.1:561241..564330 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_15434.1_32548 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29955.t1 | 1 | 1 | TNF | 237 | 337 | 8.4e-09 | 35.0 | 1.8e-12 | 1.3e-08 | 34.4 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29955.t1 atgggattaaaagaacaatcagaggcaagcaaaataggatgtcttgtatttgttggaacagcagtggctttttgtctaat ctgctgtgcttacagcacgtatgtatggtatgaaataagctctatacgggatgaaatcatcaccaagtcttcccaacctt taccagaaaaggatgtcattgcatcaagtgtagatgaaaaccataggttagataagagaagcatcaaagaaacgatcact ccaacacctagtgcggctttgagaaacagcttaaatagacggcgtaagaaaccgaccaagcgcagaggcaaaaaaggaaa gaaaagcaaaaagagatgcaaaaagatatgtaagggtagaaaaggtccaaaaggagatgcaggtcccatgggtccaaaag gggatagtggtccacctggtcagaaaggagatattggccctccaggacctatgggtccgccaggaaacagaagccagggt ataactgccgctcacttttccagcaatttttggagggatgttaacatttcggaattcggaggcattctctcgaaaaaatg tataaagaaatggcagggaacagtatgccgaaatcgaacatttatcagtaaaggagatgaccaaacaatgatgtttttgc ggccagtttcatggatgaacgacatactaaatcccttaaaaacacggtcgccaggacaatacgaagccacaaagagtgga ctatacttagtgtatttacatgttgtattttatgatactgttcctcgagaaggcgtttctatcgttcaaaaaagatcaag ctcacaaaatgatcagaagccatatactgtcctgaaatgtattgagggcagtgaaatagggaagggaatacaaaacatta aattcaagacgtgtagtatcaccagtatgcttcatattacagagaacgacattctggaaataaaatctctacatgatgga actgtgatagacttatccaaagacctgacatattttggtgcagttttactaaacgagcaaaaatag |
|
Protein
| Protein ID | pfu_aug2.0_9.1_29955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29955.t1 MGLKEQSEASKIGCLVFVGTAVAFCLICCAYSTYVWYEISSIRDEIITKSSQPLPEKDVIASSVDENHRLDKRSIKETIT PTPSAALRNSLNRRRKKPTKRRGKKGKKSKKRCKKICKGRKGPKGDAGPMGPKGDSGPPGQKGDIGPPGPMGPPGNRSQG ITAAHFSSNFWRDVNISEFGGILSKKCIKKWQGTVCRNRTFISKGDDQTMMFLRPVSWMNDILNPLKTRSPGQYEATKSG LYLVYLHVVFYDTVPREGVSIVQKRSSSQNDQKPYTVLKCIEGSEIGKGIQNIKFKTCSITSMLHITENDILEIKSLHDG TVIDLSKDLTYFGAVLLNEQK |
|