Gene
| Gene Model ID | pfu_aug2.0_9.1_29957 |
|---|---|
| Locus | scaffold9.1 : 570311 ... 590194 : + |
| To GenomeBrowser | scaffold9.1:570311..590194 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_103819.1_42435 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29957.t2 | 1 | 1 | TNF | 136 | 251 | 7.8e-11 | 41.6 | 2.2e-14 | 1.6e-10 | 40.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9.1_29957.t2 | gi|641676651|ref|XP_003247539.2| | PREDICTED: uncharacterized protein LOC100575234 [Acyrthosiphon pisum] | 1.0e-07 |
| pfu_aug2.0_9.1_29957.t2 | gi|751222378|ref|XP_011164422.1| | PREDICTED: uncharacterized protein LOC105199158 isoform X4 [Solenopsis invicta] | 1.0e-06 |
| pfu_aug2.0_9.1_29957.t2 | gi|751222376|ref|XP_011164421.1| | PREDICTED: uncharacterized protein LOC105199158 isoform X3 [Solenopsis invicta] | 1.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29957.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29957.t1 atgctacgctgcagaggaaattcagacgaaattgcaatactgaaacttcagctagaaaacctagaacggagactgcagtc cagaaatgttgatttggggaaacctacatctcggggttcagaagtcgtatcgaaagccaaaatgaatccaccagaactcg tacagaaaagtttactggaagacaggatatttcgttatcgtcggtcatacagacaggacaggtcaaagaggaaaagaaat aaaaagaaaatcagaatggttcatatagaggggagcttactgactggtgatgatcacataactaatggaacctacagtaa atggcaatatgcagattggtttaaaaaactacatgatcatgaactcaagttcaaattgaactacagcaacggtgaactca cagttaaagatggaggcctttatttgctgtacgcacagataacaatgattggacatatcaaacacgggttttatgtaaaa agaaatggcaatgtgatatcaacatgtaacaattctttcgagagtcatagaaattcgacgtcgactgacgtagtatcgtg ctcgactgttggaatattctttttacatgcacacgataggatatcgatccagcatacttcaaatcaaggaactaaagccc tttttgatgcgaattcgtcattttttggattgtatcgtgttgccatgataaagaaacgaaagaagaatcgaggagacatt cttatttaa |
|
| Transcript ID | pfu_aug2.0_9.1_29957.t2 |
| Definition | - |
>pfu_aug2.0_9.1_29957.t2 atgctacgctgcagaggaaattcagacgaaattgcaatactgaaacttcagctagaaaacctagaacggagactgcagtc cagaaatgttgatttggggaaacctacatctcggggttcagaagtcgtatcgaaagccaaaatgaatccaccagaactcg tacagaaaagtttactggaagacaggatatttcgttatcgtcggtcatacagacaggacaggtcaaagaggaaaagaaat aaaaagaaaatcagaatggttcatatagaggggagcttactgactggtgatgatcacataactaatgatacaaataatcc ttatctggtgcacgtggagggaagagggggtcttgatatacacacagaccaatcttatggaacctacagtaaatggcaat atgcagattggtttaaaaaactacatgatcatgaactcaagttcaaattgaactacagcaacggtgaactcacagttaaa gatggaggcctttatttgctgtacgcacagataacaatgattggacatatcaaacacgggttttatgtaaaaagaaatgg caatgtgatatcaacatgtaacaattctttcgagagtcatagaaattcgacgtcgactgacgtagtatcgtgctcgactg ttggaatattctttttacatgcacacgataggatatcgatccagcatacttcaaatcaaggaactaaagccctttttgat gcgaattcgtcattttttggattgtatcgtgttgccatgataaagaaacgaaagaagaatcgaggagacattcttattta a |
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Protein
| Protein ID | pfu_aug2.0_9.1_29957.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29957.t1 MLRCRGNSDEIAILKLQLENLERRLQSRNVDLGKPTSRGSEVVSKAKMNPPELVQKSLLEDRIFRYRRSYRQDRSKRKRN KKKIRMVHIEGSLLTGDDHITNGTYSKWQYADWFKKLHDHELKFKLNYSNGELTVKDGGLYLLYAQITMIGHIKHGFYVK RNGNVISTCNNSFESHRNSTSTDVVSCSTVGIFFLHAHDRISIQHTSNQGTKALFDANSSFFGLYRVAMIKKRKKNRGDI LI |
|
| Protein ID | pfu_aug2.0_9.1_29957.t2 |
| Definition | - |
>pfu_aug2.0_9.1_29957.t2 MLRCRGNSDEIAILKLQLENLERRLQSRNVDLGKPTSRGSEVVSKAKMNPPELVQKSLLEDRIFRYRRSYRQDRSKRKRN KKKIRMVHIEGSLLTGDDHITNDTNNPYLVHVEGRGGLDIHTDQSYGTYSKWQYADWFKKLHDHELKFKLNYSNGELTVK DGGLYLLYAQITMIGHIKHGFYVKRNGNVISTCNNSFESHRNSTSTDVVSCSTVGIFFLHAHDRISIQHTSNQGTKALFD ANSSFFGLYRVAMIKKRKKNRGDILI |
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