Gene
| Gene Model ID | pfu_aug2.0_9.1_29958 |
|---|---|
| Locus | scaffold9.1 : 590401 ... 597726 : + |
| To GenomeBrowser | scaffold9.1:590401..597726 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_15434.1_32549 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29958.t1 | 2 | 1 | TNF | 61 | 107 | 1.5e-09 | 37.4 | 0.041 | 610.0 | -0.1 |
| pfu_aug2.0_9.1_29958.t1 | 2 | 2 | TNF | 199 | 307 | 1.5e-09 | 37.4 | 5.7e-13 | 8.4e-09 | 35.0 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29958.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29958.t1 atggagagcaagtttacaccggcatctgatatccacgtgtattgcattaaagataacaatgctgtgcagaaatcgcaaaa cggtgtaaactgttgccattgtggtttgaaatacgtagttttggcgttgacatttgttgtggtacttcttgccgcctcta acatctatttacattttgaactaaaaaatattaagacggcagggactgcaacgcataggcactcaaagacagtatcaaac agtccacattccgggtacgctcaattaaaacaaccagatgtcatcgatgtcagtaagcgctatgtttcgcaggtggatag atccaggagacgtcggcatcgtcgtgatcgaagaagcctgagaaatcgtttattcgacttagagctacagatagatgcac ttaaaggggcaatcctaaagcaagtagtgcaccttagaggatctacggatgtcaacagtccagcaacaaggaatcctgtt catggtgtttcgggttgcggaggaagtggttgttttaggtggtcaaatccagattacatatatacaacgaattttgatta cgtcagagatcactctttaaataaagttgtgggcataaagatatcttcaccaggggtttatttgatctattctcaagtag gagtaaatggaccaagacaaagaacggacccttctgtaggctatgaaaccgttaagactgattcatcaggaagaactatc gtattgatgagaactttcataactcaggatgaaaggggcagacgcgatggaatgtttagtccacacgactctatcaacca atttggggtatttaaattacactgtgatgatactgtaattgtccggcaggatacccccgcggggaacaatccccctgatt tcatttttgacgatgaacaatccttctttggaattgtacagatcaatccaacaaatggagcattagacggaaattacgac tgcaacgctccctga |
|
Protein
| Protein ID | pfu_aug2.0_9.1_29958.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29958.t1 MESKFTPASDIHVYCIKDNNAVQKSQNGVNCCHCGLKYVVLALTFVVVLLAASNIYLHFELKNIKTAGTATHRHSKTVSN SPHSGYAQLKQPDVIDVSKRYVSQVDRSRRRRHRRDRRSLRNRLFDLELQIDALKGAILKQVVHLRGSTDVNSPATRNPV HGVSGCGGSGCFRWSNPDYIYTTNFDYVRDHSLNKVVGIKISSPGVYLIYSQVGVNGPRQRTDPSVGYETVKTDSSGRTI VLMRTFITQDERGRRDGMFSPHDSINQFGVFKLHCDDTVIVRQDTPAGNNPPDFIFDDEQSFFGIVQINPTNGALDGNYD CNAP |
|