Gene
| Gene Model ID | pfu_aug2.0_9.1_29967 |
|---|---|
| Locus | scaffold9.1 : 688242 ... 691160 : + |
| To GenomeBrowser | scaffold9.1:688242..691160 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_1283.1_07873 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29967.t1 | 1 | 1 | DUF3472 | 53 | 219 | 4.4e-26 | 92.3 | 3.7e-30 | 5.5e-26 | 92.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9.1_29967.t1 | gi|118371981|ref|XP_001019188.1| | nematoblast specific protein [Tetrahymena thermophila SB210] | 8.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29967.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29967.t1 atggatagaagagtggaccaatgttacccggatgctgccaggtctgtacacctgtggtggagacttccccgggaggtgtc gtctgttactaatgaagtatgcgtcaccaaatcctgcccggggacgtacttttgcatcattggattcaatggtggttatt cggggattcaggaactctgtgatggatccagaaaacttatcttttccgtatgggacaacgaaaaagacgaggatccagtg gaggaaaggcgggtaaaagtattgtatcacggggagggggtagaagtctccagatttggcaacgaagggactggcgggaa aaccatgatgccgtatgcgtggaaggataatgaaccagttaagttcaaggtcacagctgaatccgattcctccaaagaat ggactgcatattcttgctatgtgtacaataaccaggatcagacgtggttccatattgccacactaaaaactctgtcacag ggcaaacttatcagaggggtatattcttttgtcgaagattttcggagagacaaaaagagttttcacgagcacagaagagc tttatttggagactgctgtacaatggaccaaactgggtgcccaaagaactgtgaaaaagtacagtttaccgctgacaaca ctcccgcagacaatataaacgctggttattgtaatgtatatggaaaatatttcctagaaacgggagctgataccgtgaat actcatgcaaaactaaatgatacaatatcaaagacatgtaaataa |
|
Protein
| Protein ID | pfu_aug2.0_9.1_29967.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29967.t1 MDRRVDQCYPDAARSVHLWWRLPREVSSVTNEVCVTKSCPGTYFCIIGFNGGYSGIQELCDGSRKLIFSVWDNEKDEDPV EERRVKVLYHGEGVEVSRFGNEGTGGKTMMPYAWKDNEPVKFKVTAESDSSKEWTAYSCYVYNNQDQTWFHIATLKTLSQ GKLIRGVYSFVEDFRRDKKSFHEHRRALFGDCCTMDQTGCPKNCEKVQFTADNTPADNINAGYCNVYGKYFLETGADTVN THAKLNDTISKTCK |
|