Gene
| Gene Model ID | pfu_aug2.0_9.1_29973 |
|---|---|
| Locus | scaffold9.1 : 825997 ... 831041 : - |
| To GenomeBrowser | scaffold9.1:825997..831041 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug1.0_9305.1_68025 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9.1_29973.t1 | 1 | 1 | Homeobox | 174 | 230 | 4.3e-21 | 74.2 | 4.0e-24 | 8.5e-21 | 73.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9.1_29973.t1 | gi|269785069|ref|NP_001161490.1| | vent 1 transcription factor [Saccoglossus kowalevskii] | 1.0e-20 |
| pfu_aug2.0_9.1_29973.t1 | gi|269785071|ref|NP_001161491.1| | vent 2 transcription factor [Saccoglossus kowalevskii] | 7.0e-20 |
| pfu_aug2.0_9.1_29973.t1 | gi|676450150|ref|XP_009052285.1| | hypothetical protein LOTGIDRAFT_80212, partial [Lottia gigantea] | 1.0e-19 |
| pfu_aug2.0_9.1_29973.t1 | gi|260826730|ref|XP_002608318.1| | vent homeobox 2 [Branchiostoma floridae] | 6.0e-19 |
| pfu_aug2.0_9.1_29973.t1 | gi|260826728|ref|XP_002608317.1| | vent homeobox 1 [Branchiostoma floridae] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_9.1_29973.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29973.t1 atgacgacaactgcaccaaaagtgaagaaaatggccttttctattgaaaacttggccaggagtagtcatgatgaaccaaa atgtaaagaagctgacaataaaagttattctgccaaaattggaaataacattggaagtgatagaccgccttgcgtcatac cacatggatatggacattattcgccgatcttttacaatggattttattctttaccgtcacagcaatctgtgcccggcgag aatagtttgatttcacctccaccaaatgcgttttccacaaaaaatgtattgaaatctgccgagaaaaagaattccacatc ttataccccaaaacccgaggataaaacaccgcttcgcctgcctttgtcatcaaatgggaaaaggaagagggacgacaatg actctggagtggaaagcccatcccccgacagatctagacatagcagcgaagcaagcttttcttcaaacagttcgtatgca tctgatatagatgatcttcacgacgacacccagaaaaagaagaaagcacgaactgcttttaccacggaacagataaacga actggagaaacgttaccaggcgcaaaagtatctccctgccaacgaaaggagtatcttagctgagagactcggattggccg accaacaggtgaagacttggttccagaaccgccgtatgaaagagaaaagacagcagcgtgacgatgaacatgcgcgcagc tttgccttgccgacaggtggcgttgatgtatctcagctagcagccctggggatgccatgtccccctccctacaacatcca gggtacccctgtacacagtctaccaggattccatcacccccagttcgtatccccaagtacaagccatcctcgtcacgttc cgtatccgatgatgatgccatttcacccagcacttcatggagtcccgtctcacttgtcatctctcagtcaaccgttgcac atcaacacaaggcaagcagaatcaggactttctccgatcacaagtaaatag |
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Protein
| Protein ID | pfu_aug2.0_9.1_29973.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9.1_29973.t1 MTTTAPKVKKMAFSIENLARSSHDEPKCKEADNKSYSAKIGNNIGSDRPPCVIPHGYGHYSPIFYNGFYSLPSQQSVPGE NSLISPPPNAFSTKNVLKSAEKKNSTSYTPKPEDKTPLRLPLSSNGKRKRDDNDSGVESPSPDRSRHSSEASFSSNSSYA SDIDDLHDDTQKKKKARTAFTTEQINELEKRYQAQKYLPANERSILAERLGLADQQVKTWFQNRRMKEKRQQRDDEHARS FALPTGGVDVSQLAALGMPCPPPYNIQGTPVHSLPGFHHPQFVSPSTSHPRHVPYPMMMPFHPALHGVPSHLSSLSQPLH INTRQAESGLSPITSK |
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