Gene
| Gene Model ID | pfu_aug2.0_90.1_00211 |
|---|---|
| Locus | scaffold90.1 : 160116 ... 166420 : + |
| To GenomeBrowser | scaffold90.1:160116..166420 |
| Genes list of scaffold | scaffold90.1 |
| Synonym | pfu_aug1.0_23.1_21920 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_90.1_00211.t1 | 1 | 1 | SAM_PNT | 147 | 221 | 2.5e-14 | 52.7 | 7.1e-18 | 5.2e-14 | 51.7 |
| pfu_aug2.0_90.1_00211.t1 | 1 | 1 | Ets | 305 | 389 | 3.7e-34 | 116.7 | 1.1e-37 | 8.2e-34 | 115.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_90.1_00211.t1 | gi|585694007|ref|XP_006821737.1| | PREDICTED: SAM pointed domain-containing Ets transcription factor-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_90.1_00211.t1 | gi|242000500|ref|XP_002434893.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_90.1_00211.t1 | gi|642920691|ref|XP_008192524.1| | PREDICTED: DNA-binding protein D-ETS-4 isoform X3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_90.1_00211.t1 | gi|642920689|ref|XP_008192522.1| | PREDICTED: DNA-binding protein D-ETS-4 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_90.1_00211.t1 | gi|270006090|gb|EFA02538.1| | hypothetical protein TcasGA2_TC008243 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_90.1_00211.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00211.t1 atgtttacgactgcctttccagagcttcccagcattccactaagtgtttctgatgtcataatgaacactgaacacagcat tacatctcactcacttggttcaacaatggaacaaagacaatgtcttaatgaggaatcagaaatcgatcaagatttcagca gttacaataagaacatatctccaaatgttaccagcacagaatcatcagaaataagcaacaaagtttcttatccatcagcc gtttcaacgaagaacagggttttaaagccaaaaataacatacagttgtcttacaaattcaatacagaccctgcagccgtg tggcgacaacatagaacgacagcgtcagcagctgaggtcggtcaatgacggtactgtatttcctggaaagattgaccaaa atatcatccaggaactggagaaggaaattatagagatttgttcaactttaagaatatcatcagatccccaaaattggtca gcggattgctgcagaaaatggcttcattggcacatggggaaaatctatgcttctcaactttatcaaggcgatttctgcat gaccggattagatttgtgtagactttcattgaatgaatttcgatacttttttccgccattcggtgagactctacatgccc agttggatgtttggaaacaagccaaggagctttcattcgtaacaaatcagctggagataaattctgcaagaagtaccaac ccagcagtctctcaaacgaatacgaaggaatcgtcaagaagagttttcaaaggtggaaaatgtagatgtactgactctac ttattctgacaattcacaaccttttgagaatttcacgaacgatttggtccttgatgggaactcggatggcggaggcaaac gtccaaatgagaggaattcttcaaggcaaaccattcatctgtgggaattcctgaaggaacttttgatgcagccatctatg tacagtaattgtatccgatgggtaaaccaagaaaagggcatattcaagatagaaaattctaccagagttgccaagctttg gggaaggcgaaaaaatcgaccggccatgaactatgacaaactcagtcgttctatcagacaatactataagaagaacatca ttaagaaaaccgaacactcaaaaagacttgtttatcagttttgtcactgtgctctgtaa |
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Protein
| Protein ID | pfu_aug2.0_90.1_00211.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00211.t1 MFTTAFPELPSIPLSVSDVIMNTEHSITSHSLGSTMEQRQCLNEESEIDQDFSSYNKNISPNVTSTESSEISNKVSYPSA VSTKNRVLKPKITYSCLTNSIQTLQPCGDNIERQRQQLRSVNDGTVFPGKIDQNIIQELEKEIIEICSTLRISSDPQNWS ADCCRKWLHWHMGKIYASQLYQGDFCMTGLDLCRLSLNEFRYFFPPFGETLHAQLDVWKQAKELSFVTNQLEINSARSTN PAVSQTNTKESSRRVFKGGKCRCTDSTYSDNSQPFENFTNDLVLDGNSDGGGKRPNERNSSRQTIHLWEFLKELLMQPSM YSNCIRWVNQEKGIFKIENSTRVAKLWGRRKNRPAMNYDKLSRSIRQYYKKNIIKKTEHSKRLVYQFCHCAL |
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