Gene
| Gene Model ID | pfu_aug2.0_90.1_00213 |
|---|---|
| Locus | scaffold90.1 : 291006 ... 297810 : + |
| To GenomeBrowser | scaffold90.1:291006..297810 |
| Genes list of scaffold | scaffold90.1 |
| Synonym | pfu_aug1.0_8765.1_24474 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_90.1_00213.t1 | 3 | 1 | rve | 222 | 263 | 1.2e-19 | 70.5 | 0.63 | 4700.0 | -2.4 |
| pfu_aug2.0_90.1_00213.t1 | 1 | 1 | RVT_1 | 345 | 509 | 3.8e-11 | 42.7 | 9.7e-15 | 7.2e-11 | 41.8 |
| pfu_aug2.0_90.1_00213.t1 | 3 | 2 | rve | 396 | 416 | 1.2e-19 | 70.5 | 0.78 | 5800.0 | -2.7 |
| pfu_aug2.0_90.1_00213.t1 | 3 | 3 | rve | 741 | 839 | 1.2e-19 | 70.5 | 1.2e-22 | 8.6e-19 | 67.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_90.1_00213.t1 | gi|524907525|ref|XP_005108879.1| | PREDICTED: uncharacterized protein LOC101846691 [Aplysia californica] | 0.0 |
| pfu_aug2.0_90.1_00213.t1 | gi|390342152|ref|XP_003725599.1| | 0.0 | |
| pfu_aug2.0_90.1_00213.t1 | gi|390366831|ref|XP_003731124.1| | PREDICTED: uncharacterized protein K02A2.6-like [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_90.1_00213.t1 | gi|390357809|ref|XP_003729104.1| | PREDICTED: uncharacterized protein K02A2.6-like [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_90.1_00213.t1 | gi|542259293|ref|XP_005464854.1| | PREDICTED: uncharacterized protein K02A2.6-like [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_90.1_00213.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00213.t1 atgatacgagacaaaatagtattctctacgagtggcaaagtacaacaacttctccttcgcgaggacaacctcaacttgca acgagcaatcaaaatatgccaatcatatgaacaagctaataagcaagcacaagctatgcgtgaagatcaaggtcaagtac acaaaatcacgaaacatcagaaagatggtagacaaaggcaatctgatcgaccgcctaaggatcacaaacgtgaaaagcaa cacattaatcgttcgactccgaaaccagaagcaaaatcatgtaaattttgtgggtataaacatgtcatgcgaaaggaaga ttgcccagcatggggtaatgtctgtgatcgttgccacggtttaaaccactttaagaaaaagtgtaaaaagaaaaaagtgc atgtagtaagtaaagatacatgggaagatagtgaagcatcttactccgagtccgattcatcacaggataacggcaaatgg cttaaagctgtacatactcgaaataaggatctcgtttccgctaaaatgtgtgtaaatgattgcgaagtatcatttcaaat tgatagtgctgctgagataaacacaatttgtcaacgctatgtccgcaaagatcaagttcaacctacatcaatgaccttga ctatgtttaatgaaagtaagctaaaacctataggtcaagtcgatctcgatgtcactaacccgcaaacgtcgcaaacattt cgagttacattcgttgttgtagataataaactccaatgtttattaggtctcgaaacttcacaagagatgggtctacttac cttaaatcgtgaacgatttatatctaaagtgaaagtaaattcgaaagcactaggtgaccttggagaggcaacacttaccg tcgatccagatgtgaaaccgaaagtattaccgtgtcgtaagcttccacacgcactgaaagacaaagtgaaagtagaaatc gattctctagtagatcgtggtatacttgtacctgtaaacaaaccgacgaaatgggtgagtcaaatggctgtagtgcacaa acccaatggtaaattacgtatatgcattgatccgcaagcgcttaatactgctctacaaagggaacactaccctttaccag ttctcgacgatattctgccgaaattgcaaaaagcgaaaatcttcagcaagctcgacataaaagaagcattctggcacgtt tgcttagatgaccgttctagtgagttgacgacaatgatcacaccttttggtcgctttagatgggctcgactcccatttgg actcaaagtctctagtgagatatttcagaggaaattgagcgaaaccctatgtgaaatggaaggaatatttcctgttatcg atgatattattgtagctggatgtggcgaaacagctgagctggcaagagaagataactccgccaaactgcagaatttgtat aagaaatgtgccgagtcaaatatcattctgaatgatgataaaaaggaattatttctagaggaaatctcatttcatggcca taaaatcacaagtaatggtgtgaaagccgatgagaataaagttgacgccattctcaaaatgaaaagtccgaccgacgtat caagtgtaaagcgattctgtggaatggttcagtatatggcgaaattcttacctacacctagacgtctacaggatataatc atggaaatgaacagatacgacatacaatttcgttttgttaaaggatcgaagcttctcatagcagataccttaagtcgttc gtatctacctacagaaaccgaacacgagcgtacccgagttctctgtgtcaacgaagacatatcggatagtcgccttgaga aaatacgtaatgaaacgtcccgtgacaaatctctcatggatttgaaggaaaccatagaaaatggatggcctccagcaaaa cacatgcttaaggatacgtgcaagccttactatgacatgcgtgaaacacttagtattattgatggcgtactagtgaaagg tgaagctatcatcataccgaaatctatggtatctgagataaaatctctactacactccgctcatcttggatatgattcca tgatcagacgcgctagaggaaacattttctggctacaaatgaatgccgacatcaagcagatggcagaaaactgcgtaccc tgtcaggaaatgaaagcaaaacctatgaaaactccgcttattcaacattcggatggcaaaggaccttggaacaagatagg ccttgacctatttcagattaaggaccgcaactacttagtcagcattgactattatagcaactacatcgaagttgactact tgacttctactacctcgagtcaagttatacaaatattaaagaaacagtttgcgcactttggcataccatccatcataata tccgacaacggaacacaatttacgtcgtctgaatttcgaaaattcacggaatcttggggaatcaagcacaagacgtcttc tccaaatcatcaaagagcaaatggaaaagctgaatccgcagaaggtgttacgtacagacgaaatcgtctacacattcgac caaccgctgttgaagcagtcataagagataaatctccgatacgtgttgtcgaaccgaatattcaagtatcgtatccagtg attcaggatcctagtcagaatccgattccgaaaattgtgaatgatacaagtcaaccgttgaaacccagtgaaattgtacc cgtaattacacctacatccgctccaactcaggaaaccgcaccgtcattgcgcagatctgaccgtatccgccgacgtcctg ccaagtttgatgactatactacttaa |
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Protein
| Protein ID | pfu_aug2.0_90.1_00213.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00213.t1 MIRDKIVFSTSGKVQQLLLREDNLNLQRAIKICQSYEQANKQAQAMREDQGQVHKITKHQKDGRQRQSDRPPKDHKREKQ HINRSTPKPEAKSCKFCGYKHVMRKEDCPAWGNVCDRCHGLNHFKKKCKKKKVHVVSKDTWEDSEASYSESDSSQDNGKW LKAVHTRNKDLVSAKMCVNDCEVSFQIDSAAEINTICQRYVRKDQVQPTSMTLTMFNESKLKPIGQVDLDVTNPQTSQTF RVTFVVVDNKLQCLLGLETSQEMGLLTLNRERFISKVKVNSKALGDLGEATLTVDPDVKPKVLPCRKLPHALKDKVKVEI DSLVDRGILVPVNKPTKWVSQMAVVHKPNGKLRICIDPQALNTALQREHYPLPVLDDILPKLQKAKIFSKLDIKEAFWHV CLDDRSSELTTMITPFGRFRWARLPFGLKVSSEIFQRKLSETLCEMEGIFPVIDDIIVAGCGETAELAREDNSAKLQNLY KKCAESNIILNDDKKELFLEEISFHGHKITSNGVKADENKVDAILKMKSPTDVSSVKRFCGMVQYMAKFLPTPRRLQDII MEMNRYDIQFRFVKGSKLLIADTLSRSYLPTETEHERTRVLCVNEDISDSRLEKIRNETSRDKSLMDLKETIENGWPPAK HMLKDTCKPYYDMRETLSIIDGVLVKGEAIIIPKSMVSEIKSLLHSAHLGYDSMIRRARGNIFWLQMNADIKQMAENCVP CQEMKAKPMKTPLIQHSDGKGPWNKIGLDLFQIKDRNYLVSIDYYSNYIEVDYLTSTTSSQVIQILKKQFAHFGIPSIII SDNGTQFTSSEFRKFTESWGIKHKTSSPNHQRANGKAESAEGVTYRRNRLHIRPTAVEAVIRDKSPIRVVEPNIQVSYPV IQDPSQNPIPKIVNDTSQPLKPSEIVPVITPTSAPTQETAPSLRRSDRIRRRPAKFDDYTT |
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