Gene
| Gene Model ID | pfu_aug2.0_90.1_00215 |
|---|---|
| Locus | scaffold90.1 : 306756 ... 311710 : + |
| To GenomeBrowser | scaffold90.1:306756..311710 |
| Genes list of scaffold | scaffold90.1 |
| Synonym | pfu_aug1.0_85334.1_13344 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 15 member 4-like | GO:0005215 GO:0006857 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_90.1_00215.t1 | 2 | 1 | MFS_1 | 38 | 389 | 9.7e-06 | 24.5 | 1.7e-05 | 0.049 | 12.3 |
| pfu_aug2.0_90.1_00215.t1 | 3 | 1 | PTR2 | 99 | 240 | 0.0 | 193.9 | 4.7e-39 | 1.4e-35 | 122.7 |
| pfu_aug2.0_90.1_00215.t1 | 3 | 2 | PTR2 | 234 | 385 | 0.0 | 193.9 | 3.0e-25 | 8.8e-22 | 77.3 |
| pfu_aug2.0_90.1_00215.t1 | 2 | 2 | MFS_1 | 423 | 463 | 9.7e-06 | 24.5 | 0.003 | 8.9 | 4.9 |
| pfu_aug2.0_90.1_00215.t1 | 3 | 3 | PTR2 | 426 | 459 | 0.0 | 193.9 | 0.059 | 180.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_90.1_00215.t1 | gi|390364067|ref|XP_796185.3| | PREDICTED: solute carrier family 15 member 4 isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_90.1_00215.t1 | gi|291239067|ref|XP_002739447.1| | PREDICTED: solute carrier family 15 member 4-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_90.1_00215.t1 | gi|390353870|ref|XP_003728207.1| | PREDICTED: solute carrier family 15 member 4 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_90.1_00215.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00215.t1 atggggaaattagaaagaggcccggtggacaatggtgatatacaagtggaggtcagcgaaaagaagggattaaacatctc cggccggaaattgatggtggtcatctgtattttgttgacggaactatgtgagaggctgacctattacagcgtcctagcca acctggtgttgttctgcaccacaacactggagatgaccagtagtgaggggtcaagcgtcagtctcgtcttctcaggtact gtgttcataattccagtgttaggtggctacgtggcggattccatggcgggaaaatataacaccatacttggttcgggatt cctatatgttctaggtttggtgcttttacctgcttccgctgccgactacagcagatggttcggtgaggatgtctatggag ggaaatttgacgtctctgtggaagtaaggaagacgtttttctacatggccctggtgttcattgccctcggtacaggtggt atcaaagccaatgtcggtccgtttggagcccagcaggtcgacgatttgggaccagaggccgtgcaaacgttctttaattg gttttactggtttatcaatgctggggcgttcgtggcttacctgggtgtggcctatatccagcagaacatcagctttgaga ttggtttcctcatccctctcatcagcatgatcgttgcccttatcatctttgtagctatgcagacgactttcttccttcag agtgagagactgaacgttcagctaggagatgtcaaaatgccggctgctgcactgaacgtgtttaatacaatcatcatctt gattttgatacctatagtagatcgcataatcctaccccttatggctaagtttggtcgcagtccaacccatctacagagaa tcggttttggtttcatactagcctccctttctgtctttgtggctggcattgtggagatataccgaaagcaggaattgtct acatccggtggaatgacacaagaattggcgggagacaaatttaatgcatccactatgtccatgttcgtacaagtgccaga attcgcccttgttggagctagtgaagttttcgccagtatttctggattggagtttgcttactcacaagcaccagagtttt tacacggtcgttgtatgggattgtttcttgtggcgtctggactcggtaactacgtgtcagacgccattttgagaattgtt acgttagccaccggatccgaaccaccgaattcttggttccccgatgacataaacaaagggaagacagagtacttgttttt cttattaggagggctgatggtactagatttcatagtgtttgtgtttgtggcacgtagttataaatacagaaagcaaacaa cagaacaggaaaaatcacctatagaggcaaaggaagttgtcactgccaatgacatgcctcctccgtatgaaaccgtcaac ccggcattttcaccagatgccttagtgaccaaactgtaa |
|
Protein
| Protein ID | pfu_aug2.0_90.1_00215.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00215.t1 MGKLERGPVDNGDIQVEVSEKKGLNISGRKLMVVICILLTELCERLTYYSVLANLVLFCTTTLEMTSSEGSSVSLVFSGT VFIIPVLGGYVADSMAGKYNTILGSGFLYVLGLVLLPASAADYSRWFGEDVYGGKFDVSVEVRKTFFYMALVFIALGTGG IKANVGPFGAQQVDDLGPEAVQTFFNWFYWFINAGAFVAYLGVAYIQQNISFEIGFLIPLISMIVALIIFVAMQTTFFLQ SERLNVQLGDVKMPAAALNVFNTIIILILIPIVDRIILPLMAKFGRSPTHLQRIGFGFILASLSVFVAGIVEIYRKQELS TSGGMTQELAGDKFNASTMSMFVQVPEFALVGASEVFASISGLEFAYSQAPEFLHGRCMGLFLVASGLGNYVSDAILRIV TLATGSEPPNSWFPDDINKGKTEYLFFLLGGLMVLDFIVFVFVARSYKYRKQTTEQEKSPIEAKEVVTANDMPPPYETVN PAFSPDALVTKL |
|